Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.25■□□□□ 0.35
CDK3Q00526 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.25■□□□□ 0.35
CDK3Q00526 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK3Q00526 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK3Q00526 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.25■□□□□ 0.35
CDK3Q00526 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.25■□□□□ 0.35
CDK3Q00526 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.25■□□□□ 0.35
CDK3Q00526 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK3Q00526 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.25■□□□□ 0.35
CDK3Q00526 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.25■□□□□ 0.35
CDK3Q00526 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CDK3Q00526 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK3Q00526 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.25■□□□□ 0.35
CDK3Q00526 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CDK3Q00526 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.25■□□□□ 0.35
CDK3Q00526 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK3Q00526 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK3Q00526 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK3Q00526 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.24■□□□□ 0.35
CDK3Q00526 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CDK3Q00526 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK3Q00526 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK3Q00526 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK3Q00526 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK3Q00526 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDK3Q00526 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK3Q00526 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDK3Q00526 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CDK3Q00526 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CDK3Q00526 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK3Q00526 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK3Q00526 NCF1C-201ENST00000438382 1427 ntBASIC17.24■□□□□ 0.35
CDK3Q00526 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CDK3Q00526 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK3Q00526 AL355312.1-201ENST00000407115 2176 ntBASIC17.24■□□□□ 0.35
CDK3Q00526 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.24■□□□□ 0.35
CDK3Q00526 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.24■□□□□ 0.35
CDK3Q00526 KRT18P27-201ENST00000427733 1299 ntBASIC17.24■□□□□ 0.35
CDK3Q00526 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.24■□□□□ 0.35
CDK3Q00526 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDK3Q00526 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.24■□□□□ 0.35
CDK3Q00526 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK3Q00526 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK3Q00526 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK3Q00526 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
CDK3Q00526 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CDK3Q00526 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDK3Q00526 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CDK3Q00526 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.24■□□□□ 0.35
CDK3Q00526 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK3Q00526 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.24■□□□□ 0.35
CDK3Q00526 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDK3Q00526 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CDK3Q00526 AP002414.3-201ENST00000589352 1468 ntBASIC17.24■□□□□ 0.35
CDK3Q00526 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK3Q00526 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.23■□□□□ 0.35
CDK3Q00526 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK3Q00526 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK3Q00526 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CDK3Q00526 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CDK3Q00526 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CDK3Q00526 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK3Q00526 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.23■□□□□ 0.35
CDK3Q00526 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.23■□□□□ 0.35
CDK3Q00526 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK3Q00526 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK3Q00526 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK3Q00526 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.23■□□□□ 0.35
CDK3Q00526 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.23■□□□□ 0.35
CDK3Q00526 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.23■□□□□ 0.35
CDK3Q00526 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.23■□□□□ 0.35
CDK3Q00526 AC098831.1-202ENST00000438821 336 ntBASIC17.23■□□□□ 0.35
CDK3Q00526 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.23■□□□□ 0.35
CDK3Q00526 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.23■□□□□ 0.35
CDK3Q00526 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.23■□□□□ 0.35
CDK3Q00526 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.23■□□□□ 0.35
CDK3Q00526 IGHV3-22-201ENST00000520721 359 ntBASIC17.23■□□□□ 0.35
CDK3Q00526 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.23■□□□□ 0.35
CDK3Q00526 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.23■□□□□ 0.35
CDK3Q00526 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.23■□□□□ 0.35
CDK3Q00526 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK3Q00526 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.23■□□□□ 0.35
CDK3Q00526 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CDK3Q00526 AL139327.4-201ENST00000612362 153 ntBASIC17.23■□□□□ 0.35
CDK3Q00526 AC004706.3-202ENST00000621574 984 ntBASIC17.23■□□□□ 0.35
CDK3Q00526 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.23■□□□□ 0.35
CDK3Q00526 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK3Q00526 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK3Q00526 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK3Q00526 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK3Q00526 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CDK3Q00526 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK3Q00526 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK3Q00526 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK3Q00526 AC007613.1-201ENST00000572811 2597 ntBASIC17.23■□□□□ 0.35
CDK3Q00526 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK3Q00526 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK3Q00526 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CDK3Q00526 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK3Q00526 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms