Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNRPFP62306 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNRPFP62306 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.04■□□□□ 0.64
SNRPFP62306 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.04■□□□□ 0.64
SNRPFP62306 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.04■□□□□ 0.64
SNRPFP62306 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.04■□□□□ 0.64
SNRPFP62306 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNRPFP62306 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.04■□□□□ 0.64
SNRPFP62306 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNRPFP62306 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.04■□□□□ 0.64
SNRPFP62306 REXO1L6P-202ENST00000619970 1078 ntBASIC19.04■□□□□ 0.64
SNRPFP62306 AL355877.3-201ENST00000622820 899 ntBASIC19.04■□□□□ 0.64
SNRPFP62306 AL139288.1-201ENST00000623748 933 ntBASIC19.04■□□□□ 0.64
SNRPFP62306 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SNRPFP62306 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SNRPFP62306 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNRPFP62306 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNRPFP62306 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SNRPFP62306 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
SNRPFP62306 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPFP62306 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPFP62306 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.03■□□□□ 0.64
SNRPFP62306 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SNRPFP62306 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPFP62306 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPFP62306 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPFP62306 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPFP62306 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPFP62306 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPFP62306 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPFP62306 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPFP62306 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPFP62306 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPFP62306 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPFP62306 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.03■□□□□ 0.64
SNRPFP62306 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPFP62306 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.03■□□□□ 0.64
SNRPFP62306 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.03■□□□□ 0.64
SNRPFP62306 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.03■□□□□ 0.64
SNRPFP62306 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
SNRPFP62306 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPFP62306 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPFP62306 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.03■□□□□ 0.64
SNRPFP62306 AL732292.2-201ENST00000609649 430 ntBASIC19.03■□□□□ 0.64
SNRPFP62306 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.03■□□□□ 0.64
SNRPFP62306 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPFP62306 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.03■□□□□ 0.64
SNRPFP62306 AL135999.2-201ENST00000622438 1686 ntBASIC19.03■□□□□ 0.64
SNRPFP62306 AL645608.8-201ENST00000606034 2086 ntBASIC19.03■□□□□ 0.64
SNRPFP62306 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPFP62306 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.03■□□□□ 0.64
SNRPFP62306 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPFP62306 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPFP62306 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.03■□□□□ 0.64
SNRPFP62306 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SNRPFP62306 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPFP62306 AC090340.1-201ENST00000620778 4980 ntBASIC19.03■□□□□ 0.64
SNRPFP62306 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.03■□□□□ 0.64
SNRPFP62306 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.03■□□□□ 0.64
SNRPFP62306 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPFP62306 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPFP62306 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
SNRPFP62306 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNRPFP62306 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.02■□□□□ 0.64
SNRPFP62306 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNRPFP62306 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SNRPFP62306 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNRPFP62306 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNRPFP62306 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNRPFP62306 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNRPFP62306 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNRPFP62306 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SNRPFP62306 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNRPFP62306 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNRPFP62306 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNRPFP62306 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNRPFP62306 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNRPFP62306 ACTG1P4-201ENST00000425123 1122 ntBASIC19.02■□□□□ 0.64
SNRPFP62306 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.02■□□□□ 0.64
SNRPFP62306 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.02■□□□□ 0.64
SNRPFP62306 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.02■□□□□ 0.64
SNRPFP62306 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.02■□□□□ 0.64
SNRPFP62306 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNRPFP62306 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.02■□□□□ 0.64
SNRPFP62306 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNRPFP62306 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SNRPFP62306 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNRPFP62306 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNRPFP62306 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNRPFP62306 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNRPFP62306 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNRPFP62306 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.63
SNRPFP62306 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNRPFP62306 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNRPFP62306 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNRPFP62306 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNRPFP62306 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SNRPFP62306 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNRPFP62306 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SNRPFP62306 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms