Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.34■□□□□ 0.37
CDKN2DP55273 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CDKN2DP55273 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDKN2DP55273 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKN2DP55273 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDKN2DP55273 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDKN2DP55273 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CDKN2DP55273 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDKN2DP55273 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDKN2DP55273 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKN2DP55273 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKN2DP55273 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKN2DP55273 AL049757.1-201ENST00000616842 1596 ntBASIC17.33■□□□□ 0.37
CDKN2DP55273 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.33■□□□□ 0.37
CDKN2DP55273 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKN2DP55273 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKN2DP55273 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDKN2DP55273 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDKN2DP55273 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKN2DP55273 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.33■□□□□ 0.36
CDKN2DP55273 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.33■□□□□ 0.36
CDKN2DP55273 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CDKN2DP55273 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.33■□□□□ 0.36
CDKN2DP55273 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKN2DP55273 PCED1CP-201ENST00000419887 785 ntBASIC17.33■□□□□ 0.36
CDKN2DP55273 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.33■□□□□ 0.36
CDKN2DP55273 AC122714.2-201ENST00000502787 707 ntBASIC17.33■□□□□ 0.36
CDKN2DP55273 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.33■□□□□ 0.36
CDKN2DP55273 AC087388.1-201ENST00000571370 1112 ntBASIC17.33■□□□□ 0.36
CDKN2DP55273 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.33■□□□□ 0.36
CDKN2DP55273 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.33■□□□□ 0.36
CDKN2DP55273 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.33■□□□□ 0.36
CDKN2DP55273 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDKN2DP55273 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CDKN2DP55273 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.33■□□□□ 0.36
CDKN2DP55273 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKN2DP55273 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CDKN2DP55273 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKN2DP55273 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDKN2DP55273 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKN2DP55273 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDKN2DP55273 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2DP55273 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKN2DP55273 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CDKN2DP55273 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2DP55273 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2DP55273 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDKN2DP55273 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKN2DP55273 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2DP55273 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2DP55273 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2DP55273 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2DP55273 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2DP55273 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CDKN2DP55273 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2DP55273 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2DP55273 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.32■□□□□ 0.36
CDKN2DP55273 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDKN2DP55273 SLC25A1P3-201ENST00000395415 828 ntBASIC17.32■□□□□ 0.36
CDKN2DP55273 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2DP55273 AC246785.2-201ENST00000432512 513 ntBASIC17.32■□□□□ 0.36
CDKN2DP55273 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2DP55273 AP002383.4-201ENST00000442518 975 ntBASIC17.32■□□□□ 0.36
CDKN2DP55273 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.32■□□□□ 0.36
CDKN2DP55273 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.32■□□□□ 0.36
CDKN2DP55273 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.32■□□□□ 0.36
CDKN2DP55273 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CDKN2DP55273 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.32■□□□□ 0.36
CDKN2DP55273 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDKN2DP55273 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDKN2DP55273 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2DP55273 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2DP55273 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2DP55273 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2DP55273 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDKN2DP55273 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2DP55273 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2DP55273 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2DP55273 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.31■□□□□ 0.36
CDKN2DP55273 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2DP55273 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKN2DP55273 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2DP55273 KRT8P10-201ENST00000450021 1447 ntBASIC17.31■□□□□ 0.36
CDKN2DP55273 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2DP55273 AC099398.1-201ENST00000567919 2776 ntBASIC17.31■□□□□ 0.36
CDKN2DP55273 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2DP55273 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2DP55273 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CDKN2DP55273 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2DP55273 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CDKN2DP55273 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKN2DP55273 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2DP55273 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2DP55273 FAM220CP-201ENST00000395253 831 ntBASIC17.31■□□□□ 0.36
CDKN2DP55273 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKN2DP55273 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
CDKN2DP55273 TSSC2-201ENST00000450217 709 ntBASIC17.31■□□□□ 0.36
CDKN2DP55273 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.31■□□□□ 0.36
CDKN2DP55273 IGHV3-52-201ENST00000519770 353 ntBASIC17.31■□□□□ 0.36
CDKN2DP55273 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms