Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC4P55056 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
APOC4P55056 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
APOC4P55056 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.86□□□□□ -0.35
APOC4P55056 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
APOC4P55056 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC4P55056 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC4P55056 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
APOC4P55056 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
APOC4P55056 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
APOC4P55056 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
APOC4P55056 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC4P55056 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC4P55056 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC12.86□□□□□ -0.35
APOC4P55056 ZNF259P1-201ENST00000407656 1365 ntBASIC12.86□□□□□ -0.35
APOC4P55056 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
APOC4P55056 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC4P55056 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
APOC4P55056 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC12.86□□□□□ -0.35
APOC4P55056 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC4P55056 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC4P55056 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.86□□□□□ -0.35
APOC4P55056 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
APOC4P55056 BX005266.1-201ENST00000473402 457 ntBASIC12.86□□□□□ -0.35
APOC4P55056 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC4P55056 S100A2-206ENST00000497140 697 ntTSL 2 BASIC12.86□□□□□ -0.35
APOC4P55056 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
APOC4P55056 AC008735.5-201ENST00000623544 497 ntBASIC12.86□□□□□ -0.35
APOC4P55056 PGM5P2-202ENST00000637225 1043 ntBASIC12.86□□□□□ -0.35
APOC4P55056 AC107918.4-202ENST00000641623 219 ntBASIC12.86□□□□□ -0.35
APOC4P55056 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
APOC4P55056 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC12.86□□□□□ -0.35
APOC4P55056 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC12.86□□□□□ -0.35
APOC4P55056 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC4P55056 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
APOC4P55056 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC4P55056 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC4P55056 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC4P55056 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.86□□□□□ -0.35
APOC4P55056 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC12.86□□□□□ -0.35
APOC4P55056 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.86□□□□□ -0.35
APOC4P55056 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC4P55056 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC12.86□□□□□ -0.35
APOC4P55056 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC4P55056 IL9RP2-201ENST00000423948 1312 ntBASIC12.86□□□□□ -0.35
APOC4P55056 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
APOC4P55056 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
APOC4P55056 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC4P55056 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC4P55056 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC4P55056 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC12.85□□□□□ -0.35
APOC4P55056 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
APOC4P55056 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC12.85□□□□□ -0.35
APOC4P55056 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC12.85□□□□□ -0.35
APOC4P55056 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC12.85□□□□□ -0.35
APOC4P55056 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
APOC4P55056 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
APOC4P55056 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC12.85□□□□□ -0.35
APOC4P55056 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
APOC4P55056 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.85□□□□□ -0.35
APOC4P55056 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC12.85□□□□□ -0.35
APOC4P55056 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC12.85□□□□□ -0.35
APOC4P55056 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
APOC4P55056 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC12.85□□□□□ -0.35
APOC4P55056 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.85□□□□□ -0.35
APOC4P55056 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 AC105339.3-201ENST00000560043 636 ntBASIC12.85□□□□□ -0.35
APOC4P55056 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 AC025062.2-201ENST00000605477 670 ntBASIC12.85□□□□□ -0.35
APOC4P55056 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.85□□□□□ -0.35
APOC4P55056 AL589182.2-201ENST00000619332 1049 ntBASIC12.85□□□□□ -0.35
APOC4P55056 AC148477.8-201ENST00000624298 468 ntBASIC12.85□□□□□ -0.35
APOC4P55056 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.85□□□□□ -0.35
APOC4P55056 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
APOC4P55056 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC12.85□□□□□ -0.35
APOC4P55056 AL049757.1-201ENST00000616842 1596 ntBASIC12.85□□□□□ -0.35
APOC4P55056 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms