Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.31■□□□□ 0.68
PMS1P54277 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.31■□□□□ 0.68
PMS1P54277 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PMS1P54277 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PMS1P54277 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.3■□□□□ 0.68
PMS1P54277 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.3■□□□□ 0.68
PMS1P54277 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PMS1P54277 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PMS1P54277 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PMS1P54277 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PMS1P54277 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PMS1P54277 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PMS1P54277 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PMS1P54277 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
PMS1P54277 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
PMS1P54277 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PMS1P54277 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PMS1P54277 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PMS1P54277 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.3■□□□□ 0.68
PMS1P54277 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PMS1P54277 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PMS1P54277 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PMS1P54277 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PMS1P54277 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PMS1P54277 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PMS1P54277 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.29■□□□□ 0.68
PMS1P54277 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PMS1P54277 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PMS1P54277 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PMS1P54277 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PMS1P54277 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.29■□□□□ 0.68
PMS1P54277 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PMS1P54277 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PMS1P54277 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.29■□□□□ 0.68
PMS1P54277 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PMS1P54277 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.29■□□□□ 0.68
PMS1P54277 FAM210CP-201ENST00000445714 574 ntBASIC19.29■□□□□ 0.68
PMS1P54277 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.29■□□□□ 0.68
PMS1P54277 AC011840.4-201ENST00000578471 627 ntBASIC19.29■□□□□ 0.68
PMS1P54277 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.29■□□□□ 0.68
PMS1P54277 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PMS1P54277 AC116407.4-201ENST00000623319 1061 ntBASIC19.29■□□□□ 0.68
PMS1P54277 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.29■□□□□ 0.68
PMS1P54277 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PMS1P54277 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PMS1P54277 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PMS1P54277 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.29■□□□□ 0.68
PMS1P54277 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.29■□□□□ 0.68
PMS1P54277 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.29■□□□□ 0.68
PMS1P54277 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PMS1P54277 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PMS1P54277 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PMS1P54277 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PMS1P54277 AC106886.4-201ENST00000623557 2502 ntBASIC19.28■□□□□ 0.68
PMS1P54277 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.28■□□□□ 0.68
PMS1P54277 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.28■□□□□ 0.68
PMS1P54277 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PMS1P54277 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.28■□□□□ 0.68
PMS1P54277 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PMS1P54277 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PMS1P54277 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PMS1P54277 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.28■□□□□ 0.68
PMS1P54277 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PMS1P54277 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PMS1P54277 AC092053.1-201ENST00000605787 1936 ntBASIC19.28■□□□□ 0.68
PMS1P54277 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PMS1P54277 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
PMS1P54277 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.28■□□□□ 0.68
PMS1P54277 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PMS1P54277 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.28■□□□□ 0.68
PMS1P54277 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PMS1P54277 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.28■□□□□ 0.68
PMS1P54277 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.28■□□□□ 0.68
PMS1P54277 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PMS1P54277 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PMS1P54277 AL121761.2-201ENST00000598007 1648 ntBASIC19.28■□□□□ 0.68
PMS1P54277 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PMS1P54277 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PMS1P54277 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PMS1P54277 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PMS1P54277 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PMS1P54277 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PMS1P54277 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PMS1P54277 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PMS1P54277 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PMS1P54277 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PMS1P54277 KRT8P10-201ENST00000450021 1447 ntBASIC19.27■□□□□ 0.68
PMS1P54277 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PMS1P54277 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PMS1P54277 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
PMS1P54277 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PMS1P54277 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PMS1P54277 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PMS1P54277 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PMS1P54277 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PMS1P54277 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms