Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.61■□□□□ 0.73
LBX1P52954 RNA5SP423-201ENST00000517127 109 ntBASIC19.61■□□□□ 0.73
LBX1P52954 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.61■□□□□ 0.73
LBX1P52954 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LBX1P52954 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LBX1P52954 AL009183.1-201ENST00000603760 355 ntBASIC19.61■□□□□ 0.73
LBX1P52954 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LBX1P52954 AC018529.1-201ENST00000613063 361 ntBASIC19.61■□□□□ 0.73
LBX1P52954 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC19.61■□□□□ 0.73
LBX1P52954 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LBX1P52954 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
LBX1P52954 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LBX1P52954 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LBX1P52954 AL499627.1-201ENST00000569373 2188 ntBASIC19.61■□□□□ 0.73
LBX1P52954 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LBX1P52954 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LBX1P52954 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.61■□□□□ 0.73
LBX1P52954 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.61■□□□□ 0.73
LBX1P52954 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LBX1P52954 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LBX1P52954 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LBX1P52954 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LBX1P52954 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
LBX1P52954 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LBX1P52954 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
LBX1P52954 ACTG1P4-201ENST00000425123 1122 ntBASIC19.6■□□□□ 0.73
LBX1P52954 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.6■□□□□ 0.73
LBX1P52954 IGHV3-52-201ENST00000519770 353 ntBASIC19.6■□□□□ 0.73
LBX1P52954 FUZ-207ENST00000526575 482 ntTSL 4 BASIC19.6■□□□□ 0.73
LBX1P52954 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC19.6■□□□□ 0.73
LBX1P52954 AC008735.3-201ENST00000596646 500 ntBASIC19.6■□□□□ 0.73
LBX1P52954 AC007431.3-201ENST00000623221 587 ntBASIC19.6■□□□□ 0.73
LBX1P52954 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.6■□□□□ 0.73
LBX1P52954 AL139099.5-201ENST00000635274 300 ntBASIC19.6■□□□□ 0.73
LBX1P52954 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LBX1P52954 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LBX1P52954 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LBX1P52954 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LBX1P52954 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LBX1P52954 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LBX1P52954 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.59■□□□□ 0.73
LBX1P52954 AC087499.5-201ENST00000452760 1342 ntBASIC19.59■□□□□ 0.73
LBX1P52954 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LBX1P52954 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.59■□□□□ 0.73
LBX1P52954 HMGA1P7-201ENST00000406908 502 ntBASIC19.59■□□□□ 0.73
LBX1P52954 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.59■□□□□ 0.73
LBX1P52954 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.59■□□□□ 0.73
LBX1P52954 AC104989.1-201ENST00000519711 778 ntBASIC19.59■□□□□ 0.73
LBX1P52954 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC19.59■□□□□ 0.73
LBX1P52954 AC135586.1-201ENST00000539323 574 ntBASIC19.59■□□□□ 0.73
LBX1P52954 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.59■□□□□ 0.73
LBX1P52954 COG4-212ENST00000564653 590 ntTSL 5 BASIC19.59■□□□□ 0.73
LBX1P52954 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.59■□□□□ 0.73
LBX1P52954 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
LBX1P52954 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.59■□□□□ 0.73
LBX1P52954 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.59■□□□□ 0.73
LBX1P52954 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LBX1P52954 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LBX1P52954 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LBX1P52954 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LBX1P52954 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LBX1P52954 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
LBX1P52954 AC100803.2-201ENST00000562459 1963 ntBASIC19.58■□□□□ 0.73
LBX1P52954 ANKRD19P-201ENST00000338192 862 ntBASIC19.58■□□□□ 0.72
LBX1P52954 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
LBX1P52954 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC19.58■□□□□ 0.72
LBX1P52954 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.58■□□□□ 0.72
LBX1P52954 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LBX1P52954 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC19.58■□□□□ 0.72
LBX1P52954 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19.58■□□□□ 0.72
LBX1P52954 AL583810.1-201ENST00000553344 1045 ntBASIC19.58■□□□□ 0.72
LBX1P52954 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.58■□□□□ 0.72
LBX1P52954 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.58■□□□□ 0.72
LBX1P52954 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.58■□□□□ 0.72
LBX1P52954 AL844908.2-201ENST00000609461 460 ntBASIC19.58■□□□□ 0.72
LBX1P52954 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LBX1P52954 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LBX1P52954 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LBX1P52954 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LBX1P52954 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LBX1P52954 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LBX1P52954 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LBX1P52954 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.57■□□□□ 0.72
LBX1P52954 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.57■□□□□ 0.72
LBX1P52954 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LBX1P52954 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.57■□□□□ 0.72
LBX1P52954 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LBX1P52954 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LBX1P52954 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LBX1P52954 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.57■□□□□ 0.72
LBX1P52954 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.57■□□□□ 0.72
LBX1P52954 BRWD1P1-201ENST00000401091 371 ntBASIC19.57■□□□□ 0.72
LBX1P52954 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LBX1P52954 CROCCP4-201ENST00000457096 498 ntBASIC19.57■□□□□ 0.72
LBX1P52954 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC19.57■□□□□ 0.72
LBX1P52954 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.57■□□□□ 0.72
LBX1P52954 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.57■□□□□ 0.72
LBX1P52954 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LBX1P52954 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LBX1P52954 AL023806.1-201ENST00000603994 1649 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms