Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
SMARCA2P51531 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
SMARCA2P51531 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SMARCA2P51531 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
SMARCA2P51531 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
SMARCA2P51531 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
SMARCA2P51531 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
SMARCA2P51531 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC30.81■■■□□ 2.52
SMARCA2P51531 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SMARCA2P51531 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC30.81■■■□□ 2.52
SMARCA2P51531 MIR4515-201ENST00000584082 81 ntBASIC30.81■■■□□ 2.52
SMARCA2P51531 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC30.81■■■□□ 2.52
SMARCA2P51531 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC30.81■■■□□ 2.52
SMARCA2P51531 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC30.81■■■□□ 2.52
SMARCA2P51531 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC30.81■■■□□ 2.52
SMARCA2P51531 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC30.81■■■□□ 2.52
SMARCA2P51531 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC30.81■■■□□ 2.52
SMARCA2P51531 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
SMARCA2P51531 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
SMARCA2P51531 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SMARCA2P51531 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC30.8■■■□□ 2.52
SMARCA2P51531 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC30.8■■■□□ 2.52
SMARCA2P51531 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC30.8■■■□□ 2.52
SMARCA2P51531 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC30.8■■■□□ 2.52
SMARCA2P51531 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC30.8■■■□□ 2.52
SMARCA2P51531 AC109635.5-201ENST00000533593 962 ntBASIC30.8■■■□□ 2.52
SMARCA2P51531 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC30.8■■■□□ 2.52
SMARCA2P51531 AL359881.2-201ENST00000602973 570 ntBASIC30.8■■■□□ 2.52
SMARCA2P51531 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SMARCA2P51531 GNAS-203ENST00000306120 1878 ntBASIC30.8■■■□□ 2.52
SMARCA2P51531 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC30.8■■■□□ 2.52
SMARCA2P51531 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC30.8■■■□□ 2.52
SMARCA2P51531 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
SMARCA2P51531 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC30.8■■■□□ 2.52
SMARCA2P51531 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SMARCA2P51531 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC30.8■■■□□ 2.52
SMARCA2P51531 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SMARCA2P51531 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
SMARCA2P51531 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
SMARCA2P51531 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
SMARCA2P51531 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC30.79■■■□□ 2.52
SMARCA2P51531 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
SMARCA2P51531 TSSK5P-201ENST00000423978 907 ntBASIC30.79■■■□□ 2.52
SMARCA2P51531 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC30.79■■■□□ 2.52
SMARCA2P51531 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
SMARCA2P51531 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC30.79■■■□□ 2.52
SMARCA2P51531 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC30.79■■■□□ 2.52
SMARCA2P51531 AL008721.1-201ENST00000609964 604 ntBASIC30.79■■■□□ 2.52
SMARCA2P51531 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC30.79■■■□□ 2.52
SMARCA2P51531 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC30.79■■■□□ 2.52
SMARCA2P51531 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SMARCA2P51531 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SMARCA2P51531 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC30.79■■■□□ 2.52
SMARCA2P51531 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SMARCA2P51531 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SMARCA2P51531 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
SMARCA2P51531 AC009118.2-201ENST00000613275 655 ntBASIC30.79■■■□□ 2.52
SMARCA2P51531 AL662799.1-202ENST00000614205 422 ntBASIC30.79■■■□□ 2.52
SMARCA2P51531 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SMARCA2P51531 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC30.78■■■□□ 2.52
SMARCA2P51531 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
SMARCA2P51531 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC30.78■■■□□ 2.52
SMARCA2P51531 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC30.78■■■□□ 2.52
SMARCA2P51531 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SMARCA2P51531 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SMARCA2P51531 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
SMARCA2P51531 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC30.78■■■□□ 2.52
SMARCA2P51531 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
SMARCA2P51531 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC30.78■■■□□ 2.52
SMARCA2P51531 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
SMARCA2P51531 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SMARCA2P51531 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC30.78■■■□□ 2.52
SMARCA2P51531 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC30.78■■■□□ 2.52
SMARCA2P51531 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC30.78■■■□□ 2.52
SMARCA2P51531 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC30.78■■■□□ 2.52
SMARCA2P51531 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC30.78■■■□□ 2.52
SMARCA2P51531 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
SMARCA2P51531 SSH2-211ENST00000590153 570 ntTSL 4 BASIC30.78■■■□□ 2.52
SMARCA2P51531 AC027307.3-201ENST00000594262 1100 ntBASIC30.78■■■□□ 2.52
SMARCA2P51531 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
SMARCA2P51531 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC30.78■■■□□ 2.52
SMARCA2P51531 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
SMARCA2P51531 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
SMARCA2P51531 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC30.77■■■□□ 2.52
SMARCA2P51531 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
SMARCA2P51531 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC30.77■■■□□ 2.52
SMARCA2P51531 AC046185.3-201ENST00000623228 1824 ntBASIC30.77■■■□□ 2.52
SMARCA2P51531 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC30.77■■■□□ 2.52
SMARCA2P51531 ALG1L8P-201ENST00000533887 760 ntBASIC30.77■■■□□ 2.52
SMARCA2P51531 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
SMARCA2P51531 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
SMARCA2P51531 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC30.77■■■□□ 2.52
SMARCA2P51531 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC30.76■■■□□ 2.52
SMARCA2P51531 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.52
SMARCA2P51531 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
SMARCA2P51531 NME2P1-201ENST00000426182 414 ntBASIC30.76■■■□□ 2.52
SMARCA2P51531 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.52
SMARCA2P51531 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC30.76■■■□□ 2.52
SMARCA2P51531 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC30.76■■■□□ 2.52
SMARCA2P51531 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC30.76■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms