Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK7P50613 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.32■□□□□ 0.68
CDK7P50613 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.32■□□□□ 0.68
CDK7P50613 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDK7P50613 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.32■□□□□ 0.68
CDK7P50613 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDK7P50613 LINC00982-205ENST00000420957 435 ntBASIC19.32■□□□□ 0.68
CDK7P50613 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.32■□□□□ 0.68
CDK7P50613 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.32■□□□□ 0.68
CDK7P50613 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.32■□□□□ 0.68
CDK7P50613 AC004449.1-201ENST00000564240 433 ntBASIC19.32■□□□□ 0.68
CDK7P50613 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.32■□□□□ 0.68
CDK7P50613 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK7P50613 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.32■□□□□ 0.68
CDK7P50613 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK7P50613 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK7P50613 AL121761.2-201ENST00000598007 1648 ntBASIC19.32■□□□□ 0.68
CDK7P50613 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDK7P50613 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK7P50613 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDK7P50613 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
CDK7P50613 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK7P50613 AL031598.1-201ENST00000561511 1773 ntBASIC19.32■□□□□ 0.68
CDK7P50613 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.32■□□□□ 0.68
CDK7P50613 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK7P50613 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CDK7P50613 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CDK7P50613 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK7P50613 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK7P50613 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.31■□□□□ 0.68
CDK7P50613 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK7P50613 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.31■□□□□ 0.68
CDK7P50613 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.31■□□□□ 0.68
CDK7P50613 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.31■□□□□ 0.68
CDK7P50613 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.31■□□□□ 0.68
CDK7P50613 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.31■□□□□ 0.68
CDK7P50613 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.31■□□□□ 0.68
CDK7P50613 AC093512.1-201ENST00000617969 520 ntBASIC19.31■□□□□ 0.68
CDK7P50613 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.31■□□□□ 0.68
CDK7P50613 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CDK7P50613 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CDK7P50613 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.31■□□□□ 0.68
CDK7P50613 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK7P50613 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CDK7P50613 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.31■□□□□ 0.68
CDK7P50613 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CDK7P50613 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK7P50613 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK7P50613 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK7P50613 AC009336.1-201ENST00000608941 1553 ntBASIC19.31■□□□□ 0.68
CDK7P50613 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CDK7P50613 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK7P50613 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CDK7P50613 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.3■□□□□ 0.68
CDK7P50613 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.3■□□□□ 0.68
CDK7P50613 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK7P50613 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CDK7P50613 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK7P50613 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.3■□□□□ 0.68
CDK7P50613 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK7P50613 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK7P50613 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.3■□□□□ 0.68
CDK7P50613 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.3■□□□□ 0.68
CDK7P50613 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK7P50613 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK7P50613 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.3■□□□□ 0.68
CDK7P50613 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK7P50613 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CDK7P50613 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK7P50613 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.3■□□□□ 0.68
CDK7P50613 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK7P50613 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK7P50613 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK7P50613 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
CDK7P50613 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CDK7P50613 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.3■□□□□ 0.68
CDK7P50613 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.3■□□□□ 0.68
CDK7P50613 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.3■□□□□ 0.68
CDK7P50613 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK7P50613 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK7P50613 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.29■□□□□ 0.68
CDK7P50613 CROCCP3-202ENST00000420820 1947 ntBASIC19.29■□□□□ 0.68
CDK7P50613 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
CDK7P50613 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDK7P50613 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.29■□□□□ 0.68
CDK7P50613 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.29■□□□□ 0.68
CDK7P50613 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK7P50613 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.29■□□□□ 0.68
CDK7P50613 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.29■□□□□ 0.68
CDK7P50613 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK7P50613 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.29■□□□□ 0.68
CDK7P50613 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK7P50613 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK7P50613 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK7P50613 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CDK7P50613 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK7P50613 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.29■□□□□ 0.68
CDK7P50613 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDK7P50613 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.29■□□□□ 0.68
CDK7P50613 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms