Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDX1P47902 HBZP1-201ENST00000354915 429 ntBASIC14.39□□□□□ -0.11
CDX1P47902 PCED1CP-201ENST00000419887 785 ntBASIC14.39□□□□□ -0.11
CDX1P47902 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.39□□□□□ -0.11
CDX1P47902 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.39□□□□□ -0.11
CDX1P47902 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.39□□□□□ -0.11
CDX1P47902 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDX1P47902 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.39□□□□□ -0.11
CDX1P47902 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.39□□□□□ -0.11
CDX1P47902 AC009065.1-201ENST00000564055 1225 ntBASIC14.39□□□□□ -0.11
CDX1P47902 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDX1P47902 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
CDX1P47902 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDX1P47902 AC083906.6-201ENST00000641366 219 ntBASIC14.39□□□□□ -0.11
CDX1P47902 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDX1P47902 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.39□□□□□ -0.11
CDX1P47902 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDX1P47902 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
CDX1P47902 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDX1P47902 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.39□□□□□ -0.11
CDX1P47902 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.39□□□□□ -0.11
CDX1P47902 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDX1P47902 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDX1P47902 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDX1P47902 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDX1P47902 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CDX1P47902 AP001094.4-201ENST00000579008 2176 ntBASIC14.39□□□□□ -0.11
CDX1P47902 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.39□□□□□ -0.11
CDX1P47902 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.38□□□□□ -0.11
CDX1P47902 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDX1P47902 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDX1P47902 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDX1P47902 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CDX1P47902 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDX1P47902 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.38□□□□□ -0.11
CDX1P47902 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.38□□□□□ -0.11
CDX1P47902 AC008741.2-201ENST00000612792 3115 ntBASIC14.38□□□□□ -0.11
CDX1P47902 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.38□□□□□ -0.11
CDX1P47902 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.38□□□□□ -0.11
CDX1P47902 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDX1P47902 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDX1P47902 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDX1P47902 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDX1P47902 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.38□□□□□ -0.11
CDX1P47902 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDX1P47902 VENTXP5-201ENST00000523979 775 ntBASIC14.38□□□□□ -0.11
CDX1P47902 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.38□□□□□ -0.11
CDX1P47902 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.38□□□□□ -0.11
CDX1P47902 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.38□□□□□ -0.11
CDX1P47902 AC010240.3-201ENST00000607688 395 ntBASIC14.38□□□□□ -0.11
CDX1P47902 AC083849.1-201ENST00000615227 514 ntBASIC14.38□□□□□ -0.11
CDX1P47902 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.38□□□□□ -0.11
CDX1P47902 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDX1P47902 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.38□□□□□ -0.11
CDX1P47902 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDX1P47902 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDX1P47902 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDX1P47902 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDX1P47902 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDX1P47902 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDX1P47902 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDX1P47902 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDX1P47902 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDX1P47902 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDX1P47902 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDX1P47902 AC005332.1-201ENST00000577698 1310 ntBASIC14.38□□□□□ -0.11
CDX1P47902 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDX1P47902 ANO7L1-203ENST00000602586 1720 ntBASIC14.38□□□□□ -0.11
CDX1P47902 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDX1P47902 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.38□□□□□ -0.11
CDX1P47902 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDX1P47902 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.37□□□□□ -0.11
CDX1P47902 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDX1P47902 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
CDX1P47902 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDX1P47902 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDX1P47902 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDX1P47902 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDX1P47902 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDX1P47902 IER3-202ENST00000376377 1350 ntBASIC14.37□□□□□ -0.11
CDX1P47902 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
CDX1P47902 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDX1P47902 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.37□□□□□ -0.11
CDX1P47902 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.37□□□□□ -0.11
CDX1P47902 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDX1P47902 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDX1P47902 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDX1P47902 AL357033.4-201ENST00000617703 1807 ntBASIC14.37□□□□□ -0.11
CDX1P47902 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDX1P47902 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
CDX1P47902 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDX1P47902 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
CDX1P47902 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDX1P47902 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.37□□□□□ -0.11
CDX1P47902 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.37□□□□□ -0.11
CDX1P47902 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.37□□□□□ -0.11
CDX1P47902 AC116407.4-201ENST00000623319 1061 ntBASIC14.37□□□□□ -0.11
CDX1P47902 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.37□□□□□ -0.11
CDX1P47902 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.37□□□□□ -0.11
CDX1P47902 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms