Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA4P43681 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CHRNA4P43681 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA4P43681 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA4P43681 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA4P43681 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.72■□□□□ 0.43
CHRNA4P43681 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.72■□□□□ 0.43
CHRNA4P43681 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.72■□□□□ 0.43
CHRNA4P43681 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA4P43681 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA4P43681 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA4P43681 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA4P43681 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA4P43681 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA4P43681 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA4P43681 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.71■□□□□ 0.43
CHRNA4P43681 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA4P43681 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CHRNA4P43681 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA4P43681 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA4P43681 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.71■□□□□ 0.43
CHRNA4P43681 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CHRNA4P43681 HCG4P8-203ENST00000443049 980 ntBASIC17.71■□□□□ 0.43
CHRNA4P43681 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.71■□□□□ 0.43
CHRNA4P43681 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.71■□□□□ 0.43
CHRNA4P43681 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CHRNA4P43681 AC138894.3-201ENST00000603787 634 ntBASIC17.71■□□□□ 0.43
CHRNA4P43681 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
CHRNA4P43681 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA4P43681 AL139327.4-201ENST00000612362 153 ntBASIC17.71■□□□□ 0.43
CHRNA4P43681 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA4P43681 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA4P43681 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA4P43681 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA4P43681 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA4P43681 AC080080.1-201ENST00000625121 2420 ntBASIC17.71■□□□□ 0.43
CHRNA4P43681 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA4P43681 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA4P43681 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA4P43681 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.71■□□□□ 0.42
CHRNA4P43681 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CHRNA4P43681 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.71■□□□□ 0.42
CHRNA4P43681 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.7■□□□□ 0.42
CHRNA4P43681 INTS4P1-201ENST00000438455 1935 ntBASIC17.7■□□□□ 0.42
CHRNA4P43681 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.7■□□□□ 0.42
CHRNA4P43681 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.7■□□□□ 0.42
CHRNA4P43681 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CHRNA4P43681 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.7■□□□□ 0.42
CHRNA4P43681 AL023806.1-201ENST00000603994 1649 ntBASIC17.7■□□□□ 0.42
CHRNA4P43681 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA4P43681 NUS1P2-201ENST00000417358 873 ntBASIC17.7■□□□□ 0.42
CHRNA4P43681 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.7■□□□□ 0.42
CHRNA4P43681 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.7■□□□□ 0.42
CHRNA4P43681 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.7■□□□□ 0.42
CHRNA4P43681 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA4P43681 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.7■□□□□ 0.42
CHRNA4P43681 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA4P43681 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA4P43681 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA4P43681 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNA4P43681 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHRNA4P43681 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA4P43681 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA4P43681 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA4P43681 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA4P43681 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA4P43681 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA4P43681 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CHRNA4P43681 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA4P43681 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.69■□□□□ 0.42
CHRNA4P43681 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRNA4P43681 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.69■□□□□ 0.42
CHRNA4P43681 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA4P43681 AC114341.1-201ENST00000618070 349 ntBASIC17.69■□□□□ 0.42
CHRNA4P43681 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRNA4P43681 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRNA4P43681 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA4P43681 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA4P43681 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHRNA4P43681 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CHRNA4P43681 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA4P43681 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA4P43681 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHRNA4P43681 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA4P43681 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA4P43681 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA4P43681 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNA4P43681 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA4P43681 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA4P43681 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CHRNA4P43681 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA4P43681 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA4P43681 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.68■□□□□ 0.42
CHRNA4P43681 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA4P43681 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA4P43681 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRNA4P43681 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA4P43681 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRNA4P43681 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNA4P43681 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms