Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A3P43003 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SLC1A3P43003 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.17■□□□□ 0.18
SLC1A3P43003 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A3P43003 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A3P43003 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A3P43003 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A3P43003 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A3P43003 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC1A3P43003 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC1A3P43003 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC1A3P43003 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A3P43003 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A3P43003 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC1A3P43003 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A3P43003 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC1A3P43003 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A3P43003 AC096633.1-201ENST00000422446 749 ntBASIC16.17■□□□□ 0.18
SLC1A3P43003 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.17■□□□□ 0.18
SLC1A3P43003 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SLC1A3P43003 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC1A3P43003 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC1A3P43003 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A3P43003 KRT18P35-201ENST00000510488 1269 ntBASIC16.17■□□□□ 0.18
SLC1A3P43003 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC1A3P43003 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
SLC1A3P43003 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SLC1A3P43003 IGHV3-41-201ENST00000613121 348 ntBASIC16.17■□□□□ 0.18
SLC1A3P43003 AC124864.1-201ENST00000623408 392 ntBASIC16.17■□□□□ 0.18
SLC1A3P43003 LINC01451-201ENST00000623792 534 ntBASIC16.17■□□□□ 0.18
SLC1A3P43003 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC1A3P43003 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC1A3P43003 BX276092.7-203ENST00000637198 1536 ntBASIC16.17■□□□□ 0.18
SLC1A3P43003 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC1A3P43003 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A3P43003 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A3P43003 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC1A3P43003 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SLC1A3P43003 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SLC1A3P43003 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC1A3P43003 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A3P43003 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SLC1A3P43003 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A3P43003 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC1A3P43003 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A3P43003 AL138688.1-201ENST00000624851 1594 ntBASIC16.17■□□□□ 0.18
SLC1A3P43003 AC097374.2-201ENST00000618617 1306 ntBASIC16.17■□□□□ 0.18
SLC1A3P43003 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A3P43003 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A3P43003 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A3P43003 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC1A3P43003 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC1A3P43003 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SLC1A3P43003 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A3P43003 AL121761.2-201ENST00000598007 1648 ntBASIC16.16■□□□□ 0.18
SLC1A3P43003 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A3P43003 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC1A3P43003 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A3P43003 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A3P43003 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A3P43003 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
SLC1A3P43003 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A3P43003 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A3P43003 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SLC1A3P43003 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A3P43003 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC1A3P43003 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC1A3P43003 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC1A3P43003 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC1A3P43003 AL121672.3-201ENST00000608644 468 ntBASIC16.16■□□□□ 0.18
SLC1A3P43003 AL592071.1-201ENST00000611956 408 ntBASIC16.16■□□□□ 0.18
SLC1A3P43003 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A3P43003 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A3P43003 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC1A3P43003 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC1A3P43003 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC1A3P43003 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A3P43003 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC1A3P43003 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC1A3P43003 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A3P43003 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A3P43003 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A3P43003 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC1A3P43003 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A3P43003 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A3P43003 LINC00304-203ENST00000565008 1864 ntBASIC16.16■□□□□ 0.18
SLC1A3P43003 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SLC1A3P43003 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A3P43003 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A3P43003 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A3P43003 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A3P43003 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A3P43003 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A3P43003 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A3P43003 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A3P43003 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.15■□□□□ 0.18
SLC1A3P43003 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A3P43003 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A3P43003 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC1A3P43003 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms