Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.72■□□□□ 0.43
XPAP23025 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
XPAP23025 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
XPAP23025 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
XPAP23025 AL390961.4-201ENST00000623958 2535 ntBASIC17.72■□□□□ 0.43
XPAP23025 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
XPAP23025 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
XPAP23025 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
XPAP23025 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
XPAP23025 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
XPAP23025 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
XPAP23025 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.72■□□□□ 0.43
XPAP23025 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
XPAP23025 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
XPAP23025 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.72■□□□□ 0.43
XPAP23025 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
XPAP23025 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.72■□□□□ 0.43
XPAP23025 AF186996.4-201ENST00000467186 377 ntBASIC17.72■□□□□ 0.43
XPAP23025 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
XPAP23025 AP002469.2-201ENST00000531724 424 ntBASIC17.72■□□□□ 0.43
XPAP23025 AL662844.1-201ENST00000546340 181 ntBASIC17.72■□□□□ 0.43
XPAP23025 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
XPAP23025 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.72■□□□□ 0.43
XPAP23025 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
XPAP23025 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
XPAP23025 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.72■□□□□ 0.43
XPAP23025 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.72■□□□□ 0.43
XPAP23025 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
XPAP23025 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.72■□□□□ 0.43
XPAP23025 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.72■□□□□ 0.43
XPAP23025 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.72■□□□□ 0.43
XPAP23025 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.72■□□□□ 0.43
XPAP23025 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
XPAP23025 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.72■□□□□ 0.43
XPAP23025 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
XPAP23025 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.72■□□□□ 0.43
XPAP23025 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.72■□□□□ 0.43
XPAP23025 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.72■□□□□ 0.43
XPAP23025 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
XPAP23025 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
XPAP23025 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
XPAP23025 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
XPAP23025 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
XPAP23025 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
XPAP23025 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
XPAP23025 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.71■□□□□ 0.43
XPAP23025 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
XPAP23025 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
XPAP23025 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
XPAP23025 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
XPAP23025 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
XPAP23025 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
XPAP23025 AL356309.3-201ENST00000624132 1934 ntBASIC17.71■□□□□ 0.43
XPAP23025 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
XPAP23025 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
XPAP23025 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
XPAP23025 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
XPAP23025 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
XPAP23025 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
XPAP23025 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.71■□□□□ 0.43
XPAP23025 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
XPAP23025 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
XPAP23025 FGFR3P6-201ENST00000457012 610 ntBASIC17.71■□□□□ 0.43
XPAP23025 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.71■□□□□ 0.43
XPAP23025 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.71■□□□□ 0.43
XPAP23025 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
XPAP23025 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
XPAP23025 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
XPAP23025 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
XPAP23025 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
XPAP23025 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.71■□□□□ 0.43
XPAP23025 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
XPAP23025 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
XPAP23025 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
XPAP23025 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
XPAP23025 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
XPAP23025 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
XPAP23025 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.71■□□□□ 0.42
XPAP23025 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.71■□□□□ 0.42
XPAP23025 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
XPAP23025 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XPAP23025 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XPAP23025 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XPAP23025 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XPAP23025 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XPAP23025 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XPAP23025 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XPAP23025 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.7■□□□□ 0.42
XPAP23025 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XPAP23025 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XPAP23025 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
XPAP23025 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
XPAP23025 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
XPAP23025 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.7■□□□□ 0.42
XPAP23025 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.7■□□□□ 0.42
XPAP23025 AC109462.3-201ENST00000573934 613 ntBASIC17.7■□□□□ 0.42
XPAP23025 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
XPAP23025 AC104692.2-201ENST00000603054 253 ntBASIC17.7■□□□□ 0.42
XPAP23025 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.7■□□□□ 0.42
XPAP23025 AC073592.5-201ENST00000624854 528 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms