Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.33■□□□□ 0.21
TNFRSF1BP20333 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
TNFRSF1BP20333 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.33■□□□□ 0.21
TNFRSF1BP20333 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TNFRSF1BP20333 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.33■□□□□ 0.21
TNFRSF1BP20333 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 AC018695.7-201ENST00000624587 2492 ntBASIC16.33■□□□□ 0.2
TNFRSF1BP20333 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 KRT18P48-201ENST00000434763 852 ntBASIC16.33■□□□□ 0.2
TNFRSF1BP20333 AC092597.1-201ENST00000487352 616 ntBASIC16.33■□□□□ 0.2
TNFRSF1BP20333 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 AC140113.3-201ENST00000605663 199 ntBASIC16.33■□□□□ 0.2
TNFRSF1BP20333 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 AC009154.2-201ENST00000621177 724 ntBASIC16.33■□□□□ 0.2
TNFRSF1BP20333 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 PCDHA14-201ENST00000506751 2298 ntBASIC16.33■□□□□ 0.2
TNFRSF1BP20333 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF1BP20333 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 BX276092.7-203ENST00000637198 1536 ntBASIC16.32■□□□□ 0.2
TNFRSF1BP20333 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TNFRSF1BP20333 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 AC005915.1-201ENST00000624912 2018 ntBASIC16.31■□□□□ 0.2
TNFRSF1BP20333 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 AC087499.1-201ENST00000418141 1075 ntBASIC16.31■□□□□ 0.2
TNFRSF1BP20333 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms