Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SCG2P13521 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.19■□□□□ 0.82
SCG2P13521 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SCG2P13521 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.19■□□□□ 0.82
SCG2P13521 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.19■□□□□ 0.82
SCG2P13521 SAPCD2P3-201ENST00000455031 850 ntBASIC20.19■□□□□ 0.82
SCG2P13521 STK19B-204ENST00000512515 211 ntBASIC20.19■□□□□ 0.82
SCG2P13521 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.19■□□□□ 0.82
SCG2P13521 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCG2P13521 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.19■□□□□ 0.82
SCG2P13521 AC009336.1-201ENST00000608941 1553 ntBASIC20.19■□□□□ 0.82
SCG2P13521 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCG2P13521 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCG2P13521 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SCG2P13521 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.19■□□□□ 0.82
SCG2P13521 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.19■□□□□ 0.82
SCG2P13521 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCG2P13521 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SCG2P13521 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.18■□□□□ 0.82
SCG2P13521 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SCG2P13521 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCG2P13521 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.18■□□□□ 0.82
SCG2P13521 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
SCG2P13521 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
SCG2P13521 SPDYE21P-201ENST00000413323 827 ntBASIC20.18■□□□□ 0.82
SCG2P13521 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SCG2P13521 AL355877.3-201ENST00000622820 899 ntBASIC20.18■□□□□ 0.82
SCG2P13521 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.18■□□□□ 0.82
SCG2P13521 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCG2P13521 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCG2P13521 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.18■□□□□ 0.82
SCG2P13521 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCG2P13521 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCG2P13521 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.18■□□□□ 0.82
SCG2P13521 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.18■□□□□ 0.82
SCG2P13521 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCG2P13521 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.18■□□□□ 0.82
SCG2P13521 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCG2P13521 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SCG2P13521 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCG2P13521 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCG2P13521 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCG2P13521 HTR7P1-202ENST00000624664 4411 ntBASIC20.18■□□□□ 0.82
SCG2P13521 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCG2P13521 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCG2P13521 AC079776.2-201ENST00000641154 1609 ntBASIC20.17■□□□□ 0.82
SCG2P13521 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCG2P13521 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCG2P13521 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCG2P13521 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.17■□□□□ 0.82
SCG2P13521 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCG2P13521 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCG2P13521 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCG2P13521 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.17■□□□□ 0.82
SCG2P13521 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCG2P13521 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.17■□□□□ 0.82
SCG2P13521 FDX1P1-201ENST00000449115 551 ntBASIC20.17■□□□□ 0.82
SCG2P13521 AF238378.1-201ENST00000526806 358 ntBASIC20.17■□□□□ 0.82
SCG2P13521 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCG2P13521 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCG2P13521 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.17■□□□□ 0.82
SCG2P13521 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.17■□□□□ 0.82
SCG2P13521 MTDHP3-201ENST00000594186 672 ntBASIC20.17■□□□□ 0.82
SCG2P13521 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCG2P13521 AC008608.2-201ENST00000606089 416 ntBASIC20.17■□□□□ 0.82
SCG2P13521 AC073592.4-201ENST00000623827 446 ntBASIC20.17■□□□□ 0.82
SCG2P13521 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCG2P13521 AC046185.3-201ENST00000623228 1824 ntBASIC20.17■□□□□ 0.82
SCG2P13521 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SCG2P13521 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.17■□□□□ 0.82
SCG2P13521 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCG2P13521 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SCG2P13521 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCG2P13521 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SCG2P13521 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCG2P13521 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCG2P13521 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCG2P13521 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCG2P13521 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCG2P13521 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SCG2P13521 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SCG2P13521 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCG2P13521 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCG2P13521 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.16■□□□□ 0.82
SCG2P13521 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCG2P13521 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCG2P13521 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCG2P13521 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCG2P13521 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
SCG2P13521 EMBP1-201ENST00000458200 901 ntBASIC20.16■□□□□ 0.82
SCG2P13521 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
SCG2P13521 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.16■□□□□ 0.82
SCG2P13521 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.16■□□□□ 0.82
SCG2P13521 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCG2P13521 SIGLEC16-201ENST00000599858 1437 ntBASIC20.16■□□□□ 0.82
SCG2P13521 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCG2P13521 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
SCG2P13521 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCG2P13521 AC148477.5-201ENST00000625164 1645 ntBASIC20.16■□□□□ 0.82
SCG2P13521 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms