Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
DEFA4P12838 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.33□□□□□ -0.12
DEFA4P12838 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
DEFA4P12838 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.33□□□□□ -0.12
DEFA4P12838 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.33□□□□□ -0.12
DEFA4P12838 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.32□□□□□ -0.12
DEFA4P12838 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
DEFA4P12838 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.32□□□□□ -0.12
DEFA4P12838 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.32□□□□□ -0.12
DEFA4P12838 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
DEFA4P12838 AL139384.1-201ENST00000612143 3047 ntBASIC14.32□□□□□ -0.12
DEFA4P12838 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
DEFA4P12838 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.32□□□□□ -0.12
DEFA4P12838 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.32□□□□□ -0.12
DEFA4P12838 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.32□□□□□ -0.12
DEFA4P12838 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 AC133561.5-201ENST00000635547 218 ntBASIC14.32□□□□□ -0.12
DEFA4P12838 AL031432.5-201ENST00000641059 760 ntBASIC14.32□□□□□ -0.12
DEFA4P12838 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
DEFA4P12838 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.32□□□□□ -0.12
DEFA4P12838 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
DEFA4P12838 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA4P12838 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
DEFA4P12838 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
DEFA4P12838 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.31□□□□□ -0.12
DEFA4P12838 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
DEFA4P12838 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DEFA4P12838 AL024508.2-201ENST00000607749 1894 ntBASIC14.31□□□□□ -0.12
DEFA4P12838 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DEFA4P12838 CROCCP2-202ENST00000412962 2773 ntBASIC14.31□□□□□ -0.12
DEFA4P12838 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DEFA4P12838 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DEFA4P12838 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DEFA4P12838 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
DEFA4P12838 LINC00602-201ENST00000629776 2065 ntBASIC14.31□□□□□ -0.12
DEFA4P12838 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
DEFA4P12838 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.31□□□□□ -0.12
DEFA4P12838 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.31□□□□□ -0.12
DEFA4P12838 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.31□□□□□ -0.12
DEFA4P12838 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.31□□□□□ -0.12
DEFA4P12838 SLC25A3P1-201ENST00000443844 931 ntBASIC14.31□□□□□ -0.12
DEFA4P12838 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.31□□□□□ -0.12
DEFA4P12838 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.31□□□□□ -0.12
DEFA4P12838 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DEFA4P12838 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.31□□□□□ -0.12
DEFA4P12838 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.31□□□□□ -0.12
DEFA4P12838 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
DEFA4P12838 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DEFA4P12838 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DEFA4P12838 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
DEFA4P12838 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DEFA4P12838 AL355312.1-201ENST00000407115 2176 ntBASIC14.31□□□□□ -0.12
DEFA4P12838 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
DEFA4P12838 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.31□□□□□ -0.12
DEFA4P12838 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DEFA4P12838 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
DEFA4P12838 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
DEFA4P12838 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DEFA4P12838 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.31□□□□□ -0.12
DEFA4P12838 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
DEFA4P12838 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DEFA4P12838 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DEFA4P12838 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.31□□□□□ -0.12
DEFA4P12838 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DEFA4P12838 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DEFA4P12838 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
DEFA4P12838 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
DEFA4P12838 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
DEFA4P12838 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DEFA4P12838 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
DEFA4P12838 AL023806.1-201ENST00000603994 1649 ntBASIC14.3□□□□□ -0.12
DEFA4P12838 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
DEFA4P12838 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DEFA4P12838 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DEFA4P12838 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DEFA4P12838 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.3□□□□□ -0.12
DEFA4P12838 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
DEFA4P12838 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms