Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SLC25A24-204ENST00000569674 2357 ntBASIC30.37■■■□□ 2.45
TOP2AP11388 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
TOP2AP11388 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
TOP2AP11388 WRB-204ENST00000398753 699 ntTSL 3 BASIC30.37■■■□□ 2.45
TOP2AP11388 TFAMP1-201ENST00000412727 736 ntBASIC30.37■■■□□ 2.45
TOP2AP11388 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC30.37■■■□□ 2.45
TOP2AP11388 NAA60-208ENST00000570819 833 ntTSL 2 BASIC30.37■■■□□ 2.45
TOP2AP11388 AC138761.1-201ENST00000584393 385 ntBASIC30.37■■■□□ 2.45
TOP2AP11388 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
TOP2AP11388 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
TOP2AP11388 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TOP2AP11388 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC30.36■■■□□ 2.45
TOP2AP11388 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TOP2AP11388 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TOP2AP11388 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
TOP2AP11388 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
TOP2AP11388 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
TOP2AP11388 AC093503.3-201ENST00000624917 2352 ntBASIC30.36■■■□□ 2.45
TOP2AP11388 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
TOP2AP11388 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC30.36■■■□□ 2.45
TOP2AP11388 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC30.36■■■□□ 2.45
TOP2AP11388 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TOP2AP11388 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
TOP2AP11388 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC30.36■■■□□ 2.45
TOP2AP11388 HFE2-206ENST00000634927 506 ntTSL 4 BASIC30.36■■■□□ 2.45
TOP2AP11388 AC084121.4-201ENST00000641598 221 ntBASIC30.36■■■□□ 2.45
TOP2AP11388 AF228730.8-201ENST00000642140 221 ntBASIC30.36■■■□□ 2.45
TOP2AP11388 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC30.36■■■□□ 2.45
TOP2AP11388 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
TOP2AP11388 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TOP2AP11388 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
TOP2AP11388 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TOP2AP11388 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TOP2AP11388 AL138781.2-201ENST00000617896 1843 ntBASIC30.35■■■□□ 2.45
TOP2AP11388 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC30.35■■■□□ 2.45
TOP2AP11388 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC30.35■■■□□ 2.45
TOP2AP11388 SPCS2P4-201ENST00000436160 681 ntBASIC30.35■■■□□ 2.45
TOP2AP11388 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
TOP2AP11388 DUT-210ENST00000559935 569 ntTSL 3 BASIC30.35■■■□□ 2.45
TOP2AP11388 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC30.35■■■□□ 2.45
TOP2AP11388 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC30.34■■■□□ 2.45
TOP2AP11388 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
TOP2AP11388 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
TOP2AP11388 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
TOP2AP11388 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
TOP2AP11388 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
TOP2AP11388 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
TOP2AP11388 WBP2-203ENST00000433525 928 ntTSL 2 BASIC30.34■■■□□ 2.45
TOP2AP11388 PNKD-204ENST00000436005 978 ntTSL 5 BASIC30.34■■■□□ 2.45
TOP2AP11388 AC069262.1-201ENST00000539058 672 ntBASIC30.34■■■□□ 2.45
TOP2AP11388 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
TOP2AP11388 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
TOP2AP11388 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
TOP2AP11388 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
TOP2AP11388 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
TOP2AP11388 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC30.34■■■□□ 2.45
TOP2AP11388 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC30.34■■■□□ 2.45
TOP2AP11388 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
TOP2AP11388 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
TOP2AP11388 COPE-202ENST00000349893 948 ntTSL 2 BASIC30.33■■■□□ 2.45
TOP2AP11388 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
TOP2AP11388 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC30.33■■■□□ 2.45
TOP2AP11388 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC30.33■■■□□ 2.45
TOP2AP11388 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
TOP2AP11388 AL009183.1-201ENST00000603760 355 ntBASIC30.33■■■□□ 2.45
TOP2AP11388 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
TOP2AP11388 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
TOP2AP11388 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
TOP2AP11388 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC30.33■■■□□ 2.45
TOP2AP11388 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC30.33■■■□□ 2.45
TOP2AP11388 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
TOP2AP11388 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
TOP2AP11388 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
TOP2AP11388 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
TOP2AP11388 AL592309.1-201ENST00000443127 649 ntBASIC30.32■■■□□ 2.44
TOP2AP11388 KLF2P3-201ENST00000451977 1087 ntBASIC30.32■■■□□ 2.44
TOP2AP11388 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC30.32■■■□□ 2.44
TOP2AP11388 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC30.32■■■□□ 2.44
TOP2AP11388 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
TOP2AP11388 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
TOP2AP11388 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
TOP2AP11388 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
TOP2AP11388 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
TOP2AP11388 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC30.32■■■□□ 2.44
TOP2AP11388 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
TOP2AP11388 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
TOP2AP11388 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC30.32■■■□□ 2.44
TOP2AP11388 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
TOP2AP11388 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
TOP2AP11388 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC30.32■■■□□ 2.44
TOP2AP11388 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC30.32■■■□□ 2.44
TOP2AP11388 RPL30-202ENST00000396070 440 ntTSL 2 BASIC30.32■■■□□ 2.44
TOP2AP11388 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC30.32■■■□□ 2.44
TOP2AP11388 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC30.32■■■□□ 2.44
TOP2AP11388 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC30.32■■■□□ 2.44
TOP2AP11388 AC087641.1-201ENST00000557561 1021 ntBASIC30.32■■■□□ 2.44
TOP2AP11388 CD7-202ENST00000578509 925 ntTSL 3 BASIC30.32■■■□□ 2.44
TOP2AP11388 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC30.32■■■□□ 2.44
TOP2AP11388 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC30.32■■■□□ 2.44
TOP2AP11388 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms