Protein–RNA interactions for Protein: P0DP08

IGHV4-38-2, Immunoglobulin heavy variable 4-38-2, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-38-2P0DP08 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 RPSAP43-201ENST00000402237 625 ntBASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 CRYGEP-201ENST00000412192 528 ntBASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 LINC00982-205ENST00000420957 435 ntBASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 UPF3AP3-201ENST00000420996 769 ntBASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 GPX1P2-201ENST00000429271 606 ntBASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 IGHV3-65-201ENST00000523210 341 ntBASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 AC002347.1-201ENST00000569543 541 ntBASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-38-2P0DP08 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 BICD1-207ENST00000551848 1962 ntBASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 AC008667.4-201ENST00000607370 168 ntBASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 AL691403.2-201ENST00000618460 490 ntBASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 AC004790.2-201ENST00000623588 572 ntBASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 REXO1L11P-201ENST00000620964 1927 ntBASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-38-2P0DP08 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms