Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRGAP2CP0DJJ0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRGAP2CP0DJJ0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
SRGAP2CP0DJJ0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRGAP2CP0DJJ0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SRGAP2CP0DJJ0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.31■□□□□ 0.68
SRGAP2CP0DJJ0 AC092910.1-201ENST00000482027 1129 ntBASIC19.31■□□□□ 0.68
SRGAP2CP0DJJ0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.31■□□□□ 0.68
SRGAP2CP0DJJ0 STK19B-204ENST00000512515 211 ntBASIC19.31■□□□□ 0.68
SRGAP2CP0DJJ0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.31■□□□□ 0.68
SRGAP2CP0DJJ0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRGAP2CP0DJJ0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.31■□□□□ 0.68
SRGAP2CP0DJJ0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.31■□□□□ 0.68
SRGAP2CP0DJJ0 STK25P1-201ENST00000585406 838 ntBASIC19.31■□□□□ 0.68
SRGAP2CP0DJJ0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRGAP2CP0DJJ0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.31■□□□□ 0.68
SRGAP2CP0DJJ0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SRGAP2CP0DJJ0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SRGAP2CP0DJJ0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SRGAP2CP0DJJ0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRGAP2CP0DJJ0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 AC003669.1-201ENST00000334569 611 ntBASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 RPL13AP23-201ENST00000480739 586 ntBASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 AC008735.5-201ENST00000623544 497 ntBASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
SRGAP2CP0DJJ0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 SIGLEC30P-201ENST00000455569 941 ntBASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 AC002558.1-201ENST00000488906 803 ntBASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 AC007613.1-201ENST00000572811 2597 ntBASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.29■□□□□ 0.68
SRGAP2CP0DJJ0 AP002414.3-201ENST00000589352 1468 ntBASIC19.28■□□□□ 0.68
SRGAP2CP0DJJ0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRGAP2CP0DJJ0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.28■□□□□ 0.68
SRGAP2CP0DJJ0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRGAP2CP0DJJ0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.28■□□□□ 0.68
SRGAP2CP0DJJ0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.28■□□□□ 0.68
SRGAP2CP0DJJ0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRGAP2CP0DJJ0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
SRGAP2CP0DJJ0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.28■□□□□ 0.68
SRGAP2CP0DJJ0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.28■□□□□ 0.68
SRGAP2CP0DJJ0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.28■□□□□ 0.68
SRGAP2CP0DJJ0 AC105339.3-201ENST00000560043 636 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms