Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC6P09630 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC6P09630 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HOXC6P09630 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC6P09630 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
HOXC6P09630 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC6P09630 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXC6P09630 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXC6P09630 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXC6P09630 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC6P09630 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
HOXC6P09630 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC6P09630 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.72■□□□□ 0.75
HOXC6P09630 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXC6P09630 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.72■□□□□ 0.75
HOXC6P09630 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC6P09630 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
HOXC6P09630 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC6P09630 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXC6P09630 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.72■□□□□ 0.75
HOXC6P09630 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
HOXC6P09630 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXC6P09630 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC6P09630 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC6P09630 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC6P09630 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC6P09630 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
HOXC6P09630 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.71■□□□□ 0.75
HOXC6P09630 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC6P09630 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC6P09630 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.71■□□□□ 0.75
HOXC6P09630 AL035633.1-201ENST00000406139 838 ntBASIC19.71■□□□□ 0.75
HOXC6P09630 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.71■□□□□ 0.75
HOXC6P09630 BCRP1-201ENST00000444246 691 ntBASIC19.71■□□□□ 0.75
HOXC6P09630 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC6P09630 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.71■□□□□ 0.75
HOXC6P09630 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
HOXC6P09630 AC022145.2-201ENST00000598203 171 ntBASIC19.71■□□□□ 0.75
HOXC6P09630 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.71■□□□□ 0.75
HOXC6P09630 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
HOXC6P09630 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC6P09630 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
HOXC6P09630 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.71■□□□□ 0.75
HOXC6P09630 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.71■□□□□ 0.75
HOXC6P09630 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC6P09630 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.71■□□□□ 0.75
HOXC6P09630 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.71■□□□□ 0.75
HOXC6P09630 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC6P09630 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.71■□□□□ 0.75
HOXC6P09630 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
HOXC6P09630 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC6P09630 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC6P09630 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
HOXC6P09630 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC6P09630 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC6P09630 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC6P09630 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC6P09630 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC6P09630 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC6P09630 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC6P09630 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
HOXC6P09630 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.7■□□□□ 0.74
HOXC6P09630 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.7■□□□□ 0.74
HOXC6P09630 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.7■□□□□ 0.74
HOXC6P09630 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC6P09630 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.7■□□□□ 0.74
HOXC6P09630 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC6P09630 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC6P09630 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC6P09630 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.7■□□□□ 0.74
HOXC6P09630 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC6P09630 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC6P09630 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC6P09630 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC6P09630 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC6P09630 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC6P09630 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC6P09630 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC6P09630 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC6P09630 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC6P09630 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC6P09630 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
HOXC6P09630 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC6P09630 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC6P09630 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC6P09630 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXC6P09630 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HOXC6P09630 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC6P09630 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC6P09630 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC6P09630 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.69■□□□□ 0.74
HOXC6P09630 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXC6P09630 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.69■□□□□ 0.74
HOXC6P09630 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HOXC6P09630 AC004449.1-201ENST00000564240 433 ntBASIC19.69■□□□□ 0.74
HOXC6P09630 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC6P09630 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC6P09630 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.69■□□□□ 0.74
HOXC6P09630 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
HOXC6P09630 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms