Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 PRELID1P1-202ENST00000567272 903 ntBASIC17.79■□□□□ 0.44
HLA-DQB2P05538 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 CLEC4GP1-201ENST00000596555 870 ntBASIC17.79■□□□□ 0.44
HLA-DQB2P05538 AL732292.2-201ENST00000609649 430 ntBASIC17.79■□□□□ 0.44
HLA-DQB2P05538 AC073592.5-201ENST00000624854 528 ntBASIC17.79■□□□□ 0.44
HLA-DQB2P05538 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 AL023806.1-201ENST00000603994 1649 ntBASIC17.79■□□□□ 0.44
HLA-DQB2P05538 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB2P05538 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 KRT16P4-201ENST00000453883 522 ntBASIC17.78■□□□□ 0.44
HLA-DQB2P05538 KRT18P56-201ENST00000507275 550 ntBASIC17.78■□□□□ 0.44
HLA-DQB2P05538 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 PMPCAP1-201ENST00000508114 1576 ntBASIC17.78■□□□□ 0.44
HLA-DQB2P05538 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB2P05538 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 AC046185.3-201ENST00000623228 1824 ntBASIC17.77■□□□□ 0.44
HLA-DQB2P05538 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 TSPY19P-201ENST00000418461 509 ntBASIC17.77■□□□□ 0.44
HLA-DQB2P05538 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 TSPY18P-201ENST00000441642 509 ntBASIC17.77■□□□□ 0.44
HLA-DQB2P05538 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 KRT18P31-201ENST00000506277 1292 ntBASIC17.77■□□□□ 0.44
HLA-DQB2P05538 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 AP000867.4-201ENST00000641616 219 ntBASIC17.77■□□□□ 0.44
HLA-DQB2P05538 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms