Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 HLA-J-201ENST00000462773 1622 ntBASIC16.05■□□□□ 0.16
HIST1H2ABP04908 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 BX276092.7-203ENST00000637198 1536 ntBASIC16.04■□□□□ 0.16
HIST1H2ABP04908 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 KRT8P47-201ENST00000604727 1398 ntBASIC16.04■□□□□ 0.16
HIST1H2ABP04908 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 AC104076.2-201ENST00000448912 469 ntBASIC16.04■□□□□ 0.16
HIST1H2ABP04908 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 AC063952.2-201ENST00000498792 1227 ntBASIC16.04■□□□□ 0.16
HIST1H2ABP04908 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2ABP04908 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.03■□□□□ 0.16
HIST1H2ABP04908 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 MTCL1P1-201ENST00000446207 792 ntBASIC16.03■□□□□ 0.16
HIST1H2ABP04908 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 AL023806.1-201ENST00000603994 1649 ntBASIC16.03■□□□□ 0.16
HIST1H2ABP04908 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 AL138688.1-201ENST00000624851 1594 ntBASIC16.03■□□□□ 0.16
HIST1H2ABP04908 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2ABP04908 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H2ABP04908 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H2ABP04908 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
HIST1H2ABP04908 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H2ABP04908 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H2ABP04908 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H2ABP04908 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
HIST1H2ABP04908 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H2ABP04908 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
HIST1H2ABP04908 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
HIST1H2ABP04908 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H2ABP04908 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
HIST1H2ABP04908 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H2ABP04908 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms