Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.87■□□□□ 0.61
HLA-DRAP01903 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
HLA-DRAP01903 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DRAP01903 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.87■□□□□ 0.61
HLA-DRAP01903 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DRAP01903 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DRAP01903 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HLA-DRAP01903 AP001269.4-201ENST00000609611 512 ntBASIC18.87■□□□□ 0.61
HLA-DRAP01903 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.87■□□□□ 0.61
HLA-DRAP01903 AC141586.5-201ENST00000624546 2050 ntBASIC18.87■□□□□ 0.61
HLA-DRAP01903 AC139713.2-201ENST00000641328 2723 ntBASIC18.87■□□□□ 0.61
HLA-DRAP01903 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HLA-DRAP01903 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DRAP01903 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DRAP01903 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DRAP01903 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DRAP01903 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DRAP01903 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DRAP01903 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DRAP01903 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DRAP01903 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DRAP01903 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DRAP01903 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HLA-DRAP01903 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DRAP01903 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DRAP01903 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HLA-DRAP01903 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DRAP01903 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DRAP01903 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DRAP01903 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DRAP01903 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DRAP01903 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DRAP01903 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.86■□□□□ 0.61
HLA-DRAP01903 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.86■□□□□ 0.61
HLA-DRAP01903 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.86■□□□□ 0.61
HLA-DRAP01903 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.86■□□□□ 0.61
HLA-DRAP01903 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DRAP01903 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.86■□□□□ 0.61
HLA-DRAP01903 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DRAP01903 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HLA-DRAP01903 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HLA-DRAP01903 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DRAP01903 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DRAP01903 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DRAP01903 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HLA-DRAP01903 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HLA-DRAP01903 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DRAP01903 CROCCP2-202ENST00000412962 2773 ntBASIC18.86■□□□□ 0.61
HLA-DRAP01903 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DRAP01903 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DRAP01903 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DRAP01903 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
HLA-DRAP01903 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DRAP01903 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DRAP01903 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DRAP01903 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.85■□□□□ 0.61
HLA-DRAP01903 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DRAP01903 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.85■□□□□ 0.61
HLA-DRAP01903 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DRAP01903 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.85■□□□□ 0.61
HLA-DRAP01903 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DRAP01903 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DRAP01903 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.85■□□□□ 0.61
HLA-DRAP01903 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DRAP01903 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DRAP01903 KLF4P1-201ENST00000412782 1185 ntBASIC18.85■□□□□ 0.61
HLA-DRAP01903 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.85■□□□□ 0.61
HLA-DRAP01903 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.85■□□□□ 0.61
HLA-DRAP01903 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.85■□□□□ 0.61
HLA-DRAP01903 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DRAP01903 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HLA-DRAP01903 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DRAP01903 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DRAP01903 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DRAP01903 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.85■□□□□ 0.61
HLA-DRAP01903 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DRAP01903 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DRAP01903 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.85■□□□□ 0.61
HLA-DRAP01903 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DRAP01903 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HLA-DRAP01903 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.85■□□□□ 0.61
HLA-DRAP01903 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DRAP01903 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
HLA-DRAP01903 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DRAP01903 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.84■□□□□ 0.61
HLA-DRAP01903 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DRAP01903 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HLA-DRAP01903 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DRAP01903 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DRAP01903 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DRAP01903 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DRAP01903 AC003669.1-201ENST00000334569 611 ntBASIC18.84■□□□□ 0.61
HLA-DRAP01903 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.84■□□□□ 0.61
HLA-DRAP01903 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DRAP01903 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.84■□□□□ 0.61
HLA-DRAP01903 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HLA-DRAP01903 STK19B-204ENST00000512515 211 ntBASIC18.84■□□□□ 0.61
HLA-DRAP01903 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.84■□□□□ 0.61
HLA-DRAP01903 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.84■□□□□ 0.61
HLA-DRAP01903 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms