Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IFNA1P01562 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
IFNA1P01562 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IFNA1P01562 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
IFNA1P01562 PTPA-216ENST00000432651 857 ntTSL 2 BASIC13.93□□□□□ -0.18
IFNA1P01562 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC13.93□□□□□ -0.18
IFNA1P01562 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.93□□□□□ -0.18
IFNA1P01562 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
IFNA1P01562 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC13.93□□□□□ -0.18
IFNA1P01562 AC006449.5-201ENST00000610658 2098 ntBASIC13.93□□□□□ -0.18
IFNA1P01562 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
IFNA1P01562 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IFNA1P01562 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
IFNA1P01562 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IFNA1P01562 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IFNA1P01562 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
IFNA1P01562 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
IFNA1P01562 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.92□□□□□ -0.18
IFNA1P01562 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC13.92□□□□□ -0.18
IFNA1P01562 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
IFNA1P01562 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
IFNA1P01562 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
IFNA1P01562 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
IFNA1P01562 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.92□□□□□ -0.18
IFNA1P01562 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.92□□□□□ -0.18
IFNA1P01562 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
IFNA1P01562 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
IFNA1P01562 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.92□□□□□ -0.18
IFNA1P01562 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
IFNA1P01562 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
IFNA1P01562 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.92□□□□□ -0.18
IFNA1P01562 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.92□□□□□ -0.18
IFNA1P01562 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
IFNA1P01562 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
IFNA1P01562 DERL1-203ENST00000419562 918 ntTSL 2 BASIC13.92□□□□□ -0.18
IFNA1P01562 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
IFNA1P01562 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.92□□□□□ -0.18
IFNA1P01562 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC13.92□□□□□ -0.18
IFNA1P01562 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC13.92□□□□□ -0.18
IFNA1P01562 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.92□□□□□ -0.18
IFNA1P01562 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.92□□□□□ -0.18
IFNA1P01562 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
IFNA1P01562 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
IFNA1P01562 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
IFNA1P01562 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
IFNA1P01562 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.92□□□□□ -0.18
IFNA1P01562 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.92□□□□□ -0.18
IFNA1P01562 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
IFNA1P01562 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
IFNA1P01562 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
IFNA1P01562 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.91□□□□□ -0.18
IFNA1P01562 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
IFNA1P01562 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.91□□□□□ -0.18
IFNA1P01562 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
IFNA1P01562 ASL-204ENST00000395331 1538 ntTSL 5 BASIC13.91□□□□□ -0.18
IFNA1P01562 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
IFNA1P01562 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.91□□□□□ -0.18
IFNA1P01562 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.91□□□□□ -0.18
IFNA1P01562 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.91□□□□□ -0.18
IFNA1P01562 AC133552.2-202ENST00000575694 574 ntBASIC13.91□□□□□ -0.18
IFNA1P01562 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC13.91□□□□□ -0.18
IFNA1P01562 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
IFNA1P01562 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.91□□□□□ -0.18
IFNA1P01562 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC13.91□□□□□ -0.18
IFNA1P01562 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
IFNA1P01562 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
IFNA1P01562 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
IFNA1P01562 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.91□□□□□ -0.18
IFNA1P01562 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
IFNA1P01562 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.91□□□□□ -0.18
IFNA1P01562 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
IFNA1P01562 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
IFNA1P01562 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms