Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
OPHN1O60890 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.36■□□□□ 0.53
OPHN1O60890 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
OPHN1O60890 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
OPHN1O60890 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
OPHN1O60890 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
OPHN1O60890 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
OPHN1O60890 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
OPHN1O60890 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
OPHN1O60890 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
OPHN1O60890 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
OPHN1O60890 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
OPHN1O60890 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
OPHN1O60890 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.36■□□□□ 0.53
OPHN1O60890 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
OPHN1O60890 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
OPHN1O60890 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
OPHN1O60890 KRT18P65-201ENST00000439811 1286 ntBASIC18.36■□□□□ 0.53
OPHN1O60890 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.36■□□□□ 0.53
OPHN1O60890 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
OPHN1O60890 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
OPHN1O60890 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.36■□□□□ 0.53
OPHN1O60890 RNF126P1-202ENST00000569893 925 ntBASIC18.36■□□□□ 0.53
OPHN1O60890 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.36■□□□□ 0.53
OPHN1O60890 AL121912.1-201ENST00000603683 238 ntBASIC18.36■□□□□ 0.53
OPHN1O60890 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
OPHN1O60890 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.36■□□□□ 0.53
OPHN1O60890 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
OPHN1O60890 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.36■□□□□ 0.53
OPHN1O60890 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
OPHN1O60890 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
OPHN1O60890 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
OPHN1O60890 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
OPHN1O60890 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.35■□□□□ 0.53
OPHN1O60890 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.35■□□□□ 0.53
OPHN1O60890 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
OPHN1O60890 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
OPHN1O60890 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.35■□□□□ 0.53
OPHN1O60890 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.35■□□□□ 0.53
OPHN1O60890 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
OPHN1O60890 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
OPHN1O60890 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
OPHN1O60890 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
OPHN1O60890 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
OPHN1O60890 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
OPHN1O60890 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
OPHN1O60890 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
OPHN1O60890 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.35■□□□□ 0.53
OPHN1O60890 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.35■□□□□ 0.53
OPHN1O60890 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.35■□□□□ 0.53
OPHN1O60890 AC074051.2-201ENST00000565115 352 ntBASIC18.35■□□□□ 0.53
OPHN1O60890 AC090616.6-201ENST00000582640 721 ntBASIC18.35■□□□□ 0.53
OPHN1O60890 AC138894.3-201ENST00000603787 634 ntBASIC18.35■□□□□ 0.53
OPHN1O60890 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
OPHN1O60890 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.35■□□□□ 0.53
OPHN1O60890 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.35■□□□□ 0.53
OPHN1O60890 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
OPHN1O60890 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
OPHN1O60890 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.35■□□□□ 0.53
OPHN1O60890 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
OPHN1O60890 CROCCP1-201ENST00000426910 5675 ntBASIC18.35■□□□□ 0.53
OPHN1O60890 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
OPHN1O60890 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
OPHN1O60890 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
OPHN1O60890 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
OPHN1O60890 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
OPHN1O60890 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.34■□□□□ 0.53
OPHN1O60890 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
OPHN1O60890 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.34■□□□□ 0.53
OPHN1O60890 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.34■□□□□ 0.53
OPHN1O60890 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.34■□□□□ 0.53
OPHN1O60890 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
OPHN1O60890 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.34■□□□□ 0.53
OPHN1O60890 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.34■□□□□ 0.53
OPHN1O60890 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.34■□□□□ 0.53
OPHN1O60890 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.34■□□□□ 0.53
OPHN1O60890 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.34■□□□□ 0.53
OPHN1O60890 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.34■□□□□ 0.53
OPHN1O60890 IGHV3-41-201ENST00000613121 348 ntBASIC18.34■□□□□ 0.53
OPHN1O60890 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.34■□□□□ 0.53
OPHN1O60890 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
OPHN1O60890 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
OPHN1O60890 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
OPHN1O60890 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
OPHN1O60890 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
OPHN1O60890 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
OPHN1O60890 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
OPHN1O60890 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.34■□□□□ 0.53
OPHN1O60890 Z83836.1-201ENST00000624605 1642 ntBASIC18.34■□□□□ 0.53
OPHN1O60890 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
OPHN1O60890 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
OPHN1O60890 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
OPHN1O60890 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
OPHN1O60890 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
OPHN1O60890 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
OPHN1O60890 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
OPHN1O60890 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.33■□□□□ 0.53
OPHN1O60890 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.33■□□□□ 0.53
OPHN1O60890 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
OPHN1O60890 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms