Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
PRAMEF4O60810 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.88■□□□□ 0.29
PRAMEF4O60810 AP000867.3-201ENST00000524675 377 ntBASIC16.88■□□□□ 0.29
PRAMEF4O60810 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.88■□□□□ 0.29
PRAMEF4O60810 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
PRAMEF4O60810 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.88■□□□□ 0.29
PRAMEF4O60810 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.88■□□□□ 0.29
PRAMEF4O60810 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.88■□□□□ 0.29
PRAMEF4O60810 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.88■□□□□ 0.29
PRAMEF4O60810 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF4O60810 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF4O60810 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF4O60810 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PRAMEF4O60810 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF4O60810 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF4O60810 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PRAMEF4O60810 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF4O60810 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF4O60810 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.88■□□□□ 0.29
PRAMEF4O60810 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF4O60810 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF4O60810 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.87■□□□□ 0.29
PRAMEF4O60810 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF4O60810 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF4O60810 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.87■□□□□ 0.29
PRAMEF4O60810 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF4O60810 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF4O60810 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.87■□□□□ 0.29
PRAMEF4O60810 AC132938.5-201ENST00000624980 1813 ntBASIC16.87■□□□□ 0.29
PRAMEF4O60810 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.87■□□□□ 0.29
PRAMEF4O60810 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF4O60810 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF4O60810 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF4O60810 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PRAMEF4O60810 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF4O60810 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PRAMEF4O60810 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.87■□□□□ 0.29
PRAMEF4O60810 AC103564.2-201ENST00000432853 1299 ntBASIC16.87■□□□□ 0.29
PRAMEF4O60810 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.87■□□□□ 0.29
PRAMEF4O60810 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.87■□□□□ 0.29
PRAMEF4O60810 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.87■□□□□ 0.29
PRAMEF4O60810 STK25P1-201ENST00000585406 838 ntBASIC16.87■□□□□ 0.29
PRAMEF4O60810 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.87■□□□□ 0.29
PRAMEF4O60810 AD001527.2-201ENST00000622994 785 ntBASIC16.87■□□□□ 0.29
PRAMEF4O60810 AC093458.2-201ENST00000623150 629 ntBASIC16.87■□□□□ 0.29
PRAMEF4O60810 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.87■□□□□ 0.29
PRAMEF4O60810 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF4O60810 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF4O60810 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF4O60810 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF4O60810 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.87■□□□□ 0.29
PRAMEF4O60810 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.87■□□□□ 0.29
PRAMEF4O60810 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF4O60810 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF4O60810 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF4O60810 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF4O60810 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.87■□□□□ 0.29
PRAMEF4O60810 AC016396.2-201ENST00000562575 1417 ntBASIC16.87■□□□□ 0.29
PRAMEF4O60810 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF4O60810 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF4O60810 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.86■□□□□ 0.29
PRAMEF4O60810 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF4O60810 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
PRAMEF4O60810 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF4O60810 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.86■□□□□ 0.29
PRAMEF4O60810 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF4O60810 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF4O60810 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF4O60810 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF4O60810 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
PRAMEF4O60810 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PRAMEF4O60810 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.86■□□□□ 0.29
PRAMEF4O60810 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF4O60810 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF4O60810 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF4O60810 AC096582.2-201ENST00000510860 516 ntBASIC16.86■□□□□ 0.29
PRAMEF4O60810 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.86■□□□□ 0.29
PRAMEF4O60810 AC092329.2-201ENST00000598402 547 ntBASIC16.86■□□□□ 0.29
PRAMEF4O60810 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF4O60810 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF4O60810 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF4O60810 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PRAMEF4O60810 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF4O60810 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF4O60810 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF4O60810 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF4O60810 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF4O60810 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF4O60810 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
PRAMEF4O60810 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
PRAMEF4O60810 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF4O60810 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF4O60810 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF4O60810 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF4O60810 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PRAMEF4O60810 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
PRAMEF4O60810 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF4O60810 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF4O60810 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF4O60810 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms