Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
SNX3O60493 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
SNX3O60493 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX3O60493 AC233263.1-201ENST00000578059 224 ntBASIC17.32■□□□□ 0.36
SNX3O60493 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.32■□□□□ 0.36
SNX3O60493 CR392000.1-201ENST00000624770 1228 ntBASIC17.32■□□□□ 0.36
SNX3O60493 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.32■□□□□ 0.36
SNX3O60493 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX3O60493 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNX3O60493 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
SNX3O60493 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.32■□□□□ 0.36
SNX3O60493 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX3O60493 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX3O60493 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SNX3O60493 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNX3O60493 AL365203.3-201ENST00000609742 2057 ntBASIC17.32■□□□□ 0.36
SNX3O60493 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX3O60493 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNX3O60493 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNX3O60493 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX3O60493 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.31■□□□□ 0.36
SNX3O60493 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX3O60493 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX3O60493 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.31■□□□□ 0.36
SNX3O60493 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX3O60493 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX3O60493 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.31■□□□□ 0.36
SNX3O60493 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.31■□□□□ 0.36
SNX3O60493 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.31■□□□□ 0.36
SNX3O60493 AL138781.1-201ENST00000566567 1274 ntBASIC17.31■□□□□ 0.36
SNX3O60493 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX3O60493 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX3O60493 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX3O60493 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SNX3O60493 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX3O60493 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNX3O60493 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX3O60493 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX3O60493 AC092364.2-201ENST00000596710 2692 ntBASIC17.31■□□□□ 0.36
SNX3O60493 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX3O60493 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX3O60493 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SNX3O60493 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX3O60493 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX3O60493 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX3O60493 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX3O60493 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX3O60493 AC093525.9-201ENST00000624961 1746 ntBASIC17.3■□□□□ 0.36
SNX3O60493 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.3■□□□□ 0.36
SNX3O60493 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX3O60493 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SNX3O60493 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.3■□□□□ 0.36
SNX3O60493 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNX3O60493 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SNX3O60493 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX3O60493 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX3O60493 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX3O60493 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX3O60493 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNX3O60493 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.3■□□□□ 0.36
SNX3O60493 KRT17P3-201ENST00000420566 1262 ntBASIC17.3■□□□□ 0.36
SNX3O60493 AC026271.2-201ENST00000428091 497 ntBASIC17.3■□□□□ 0.36
SNX3O60493 CA15P1-201ENST00000481698 905 ntBASIC17.3■□□□□ 0.36
SNX3O60493 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.3■□□□□ 0.36
SNX3O60493 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNX3O60493 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.3■□□□□ 0.36
SNX3O60493 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.3■□□□□ 0.36
SNX3O60493 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNX3O60493 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX3O60493 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX3O60493 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX3O60493 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.3■□□□□ 0.36
SNX3O60493 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX3O60493 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
SNX3O60493 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX3O60493 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.3■□□□□ 0.36
SNX3O60493 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.3■□□□□ 0.36
SNX3O60493 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNX3O60493 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX3O60493 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
SNX3O60493 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.29■□□□□ 0.36
SNX3O60493 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SNX3O60493 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
SNX3O60493 KRT8P47-201ENST00000604727 1398 ntBASIC17.29■□□□□ 0.36
SNX3O60493 AC023824.1-201ENST00000562945 2975 ntBASIC17.29■□□□□ 0.36
SNX3O60493 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX3O60493 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX3O60493 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.29■□□□□ 0.36
SNX3O60493 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNX3O60493 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNX3O60493 MESTP1-201ENST00000404287 994 ntBASIC17.29■□□□□ 0.36
SNX3O60493 NCF1B-203ENST00000435988 1254 ntBASIC17.29■□□□□ 0.36
SNX3O60493 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.29■□□□□ 0.36
SNX3O60493 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.29■□□□□ 0.36
SNX3O60493 AC124016.1-201ENST00000609552 612 ntBASIC17.29■□□□□ 0.36
SNX3O60493 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX3O60493 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX3O60493 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.29■□□□□ 0.36
SNX3O60493 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNX3O60493 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms