Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRKNO60260 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.35■□□□□ 0.21
PRKNO60260 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.35■□□□□ 0.21
PRKNO60260 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.35■□□□□ 0.21
PRKNO60260 AD001527.2-201ENST00000622994 785 ntBASIC16.35■□□□□ 0.21
PRKNO60260 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.35■□□□□ 0.21
PRKNO60260 AP000867.4-201ENST00000641616 219 ntBASIC16.35■□□□□ 0.21
PRKNO60260 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRKNO60260 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRKNO60260 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PRKNO60260 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.35■□□□□ 0.21
PRKNO60260 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.35■□□□□ 0.21
PRKNO60260 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRKNO60260 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRKNO60260 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRKNO60260 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PRKNO60260 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.35■□□□□ 0.21
PRKNO60260 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
PRKNO60260 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.35■□□□□ 0.21
PRKNO60260 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PRKNO60260 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRKNO60260 KRT8P10-201ENST00000450021 1447 ntBASIC16.35■□□□□ 0.21
PRKNO60260 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.35■□□□□ 0.21
PRKNO60260 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRKNO60260 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRKNO60260 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRKNO60260 AL049757.1-201ENST00000616842 1596 ntBASIC16.34■□□□□ 0.21
PRKNO60260 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRKNO60260 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.34■□□□□ 0.21
PRKNO60260 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.34■□□□□ 0.21
PRKNO60260 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PRKNO60260 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PRKNO60260 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PRKNO60260 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
PRKNO60260 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PRKNO60260 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRKNO60260 MRPL3P1-201ENST00000400109 1033 ntBASIC16.34■□□□□ 0.21
PRKNO60260 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.34■□□□□ 0.21
PRKNO60260 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.34■□□□□ 0.21
PRKNO60260 FDX1P1-201ENST00000449115 551 ntBASIC16.34■□□□□ 0.21
PRKNO60260 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PRKNO60260 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.34■□□□□ 0.21
PRKNO60260 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.34■□□□□ 0.21
PRKNO60260 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRKNO60260 AC019129.2-201ENST00000609837 1235 ntBASIC16.34■□□□□ 0.21
PRKNO60260 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PRKNO60260 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.34■□□□□ 0.21
PRKNO60260 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRKNO60260 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.34■□□□□ 0.21
PRKNO60260 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRKNO60260 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRKNO60260 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRKNO60260 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRKNO60260 AC004817.3-201ENST00000602957 2129 ntBASIC16.34■□□□□ 0.21
PRKNO60260 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.34■□□□□ 0.21
PRKNO60260 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRKNO60260 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.34■□□□□ 0.21
PRKNO60260 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.34■□□□□ 0.21
PRKNO60260 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRKNO60260 BX276092.7-203ENST00000637198 1536 ntBASIC16.34■□□□□ 0.21
PRKNO60260 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRKNO60260 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRKNO60260 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRKNO60260 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.34■□□□□ 0.21
PRKNO60260 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRKNO60260 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.33■□□□□ 0.21
PRKNO60260 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.33■□□□□ 0.21
PRKNO60260 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.33■□□□□ 0.21
PRKNO60260 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRKNO60260 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
PRKNO60260 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRKNO60260 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRKNO60260 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRKNO60260 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PRKNO60260 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
PRKNO60260 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRKNO60260 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRKNO60260 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRKNO60260 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRKNO60260 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRKNO60260 RBM17P3-201ENST00000417687 1192 ntBASIC16.33■□□□□ 0.2
PRKNO60260 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.33■□□□□ 0.2
PRKNO60260 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.33■□□□□ 0.2
PRKNO60260 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
PRKNO60260 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.33■□□□□ 0.2
PRKNO60260 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRKNO60260 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.33■□□□□ 0.2
PRKNO60260 AC109462.3-201ENST00000573934 613 ntBASIC16.33■□□□□ 0.2
PRKNO60260 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.33■□□□□ 0.2
PRKNO60260 SLC25A6P4-201ENST00000586535 553 ntBASIC16.33■□□□□ 0.2
PRKNO60260 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.33■□□□□ 0.2
PRKNO60260 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PRKNO60260 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRKNO60260 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.33■□□□□ 0.2
PRKNO60260 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.33■□□□□ 0.2
PRKNO60260 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRKNO60260 PMPCAP1-201ENST00000508114 1576 ntBASIC16.33■□□□□ 0.2
PRKNO60260 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.33■□□□□ 0.2
PRKNO60260 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRKNO60260 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms