Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 MIR3687-2-201ENST00000577708 61 ntBASIC22.42■■□□□ 1.18
KCNQ3O43525 CYB561-216ENST00000582297 897 ntTSL 3 BASIC22.42■■□□□ 1.18
KCNQ3O43525 MIR3687-1-201ENST00000614492 61 ntBASIC22.42■■□□□ 1.18
KCNQ3O43525 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC22.42■■□□□ 1.18
KCNQ3O43525 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC22.42■■□□□ 1.18
KCNQ3O43525 AC046185.3-201ENST00000623228 1824 ntBASIC22.42■■□□□ 1.18
KCNQ3O43525 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC22.42■■□□□ 1.18
KCNQ3O43525 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
KCNQ3O43525 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
KCNQ3O43525 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC22.42■■□□□ 1.18
KCNQ3O43525 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC22.41■■□□□ 1.18
KCNQ3O43525 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
KCNQ3O43525 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
KCNQ3O43525 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
KCNQ3O43525 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
KCNQ3O43525 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
KCNQ3O43525 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
KCNQ3O43525 METTL26-205ENST00000397666 726 ntTSL 2 BASIC22.41■■□□□ 1.18
KCNQ3O43525 MRPL20P1-201ENST00000400819 433 ntBASIC22.41■■□□□ 1.18
KCNQ3O43525 COA5-202ENST00000409997 557 ntTSL 4 BASIC22.41■■□□□ 1.18
KCNQ3O43525 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC22.41■■□□□ 1.18
KCNQ3O43525 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC22.41■■□□□ 1.18
KCNQ3O43525 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC22.41■■□□□ 1.18
KCNQ3O43525 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC22.41■■□□□ 1.18
KCNQ3O43525 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC22.41■■□□□ 1.18
KCNQ3O43525 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC22.41■■□□□ 1.18
KCNQ3O43525 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC22.41■■□□□ 1.18
KCNQ3O43525 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC22.41■■□□□ 1.18
KCNQ3O43525 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
KCNQ3O43525 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
KCNQ3O43525 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC22.41■■□□□ 1.18
KCNQ3O43525 TK1-204ENST00000590430 683 ntTSL 3 BASIC22.41■■□□□ 1.18
KCNQ3O43525 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC22.41■■□□□ 1.18
KCNQ3O43525 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC22.41■■□□□ 1.18
KCNQ3O43525 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
KCNQ3O43525 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
KCNQ3O43525 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC22.41■■□□□ 1.18
KCNQ3O43525 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
KCNQ3O43525 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC22.41■■□□□ 1.18
KCNQ3O43525 LINC00304-203ENST00000565008 1864 ntBASIC22.41■■□□□ 1.18
KCNQ3O43525 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
KCNQ3O43525 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
KCNQ3O43525 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
KCNQ3O43525 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
KCNQ3O43525 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC22.4■■□□□ 1.18
KCNQ3O43525 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
KCNQ3O43525 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
KCNQ3O43525 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC22.4■■□□□ 1.18
KCNQ3O43525 DNAJB3-202ENST00000449667 1266 ntBASIC22.4■■□□□ 1.18
KCNQ3O43525 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC22.4■■□□□ 1.18
KCNQ3O43525 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC22.4■■□□□ 1.18
KCNQ3O43525 AC010654.1-201ENST00000615722 808 ntBASIC22.4■■□□□ 1.18
KCNQ3O43525 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC22.4■■□□□ 1.18
KCNQ3O43525 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
KCNQ3O43525 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KCNQ3O43525 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
KCNQ3O43525 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC22.4■■□□□ 1.18
KCNQ3O43525 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC22.4■■□□□ 1.18
KCNQ3O43525 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC22.4■■□□□ 1.18
KCNQ3O43525 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
KCNQ3O43525 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
KCNQ3O43525 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC22.39■■□□□ 1.18
KCNQ3O43525 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
KCNQ3O43525 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
KCNQ3O43525 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
KCNQ3O43525 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC22.39■■□□□ 1.18
KCNQ3O43525 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.39■■□□□ 1.17
KCNQ3O43525 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
KCNQ3O43525 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
KCNQ3O43525 GGCT-205ENST00000409436 954 ntTSL 3 BASIC22.39■■□□□ 1.17
KCNQ3O43525 ACTG1P4-201ENST00000425123 1122 ntBASIC22.39■■□□□ 1.17
KCNQ3O43525 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
KCNQ3O43525 AL139327.4-201ENST00000612362 153 ntBASIC22.39■■□□□ 1.17
KCNQ3O43525 AC004877.2-201ENST00000623941 599 ntBASIC22.39■■□□□ 1.17
KCNQ3O43525 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC22.39■■□□□ 1.17
KCNQ3O43525 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
KCNQ3O43525 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
KCNQ3O43525 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
KCNQ3O43525 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC22.39■■□□□ 1.17
KCNQ3O43525 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC22.39■■□□□ 1.17
KCNQ3O43525 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
KCNQ3O43525 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
KCNQ3O43525 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC22.38■■□□□ 1.17
KCNQ3O43525 PI4KAP1-204ENST00000612579 1703 ntBASIC22.38■■□□□ 1.17
KCNQ3O43525 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC22.38■■□□□ 1.17
KCNQ3O43525 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
KCNQ3O43525 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
KCNQ3O43525 ENSA-206ENST00000361631 725 ntTSL 2 BASIC22.38■■□□□ 1.17
KCNQ3O43525 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
KCNQ3O43525 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
KCNQ3O43525 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
KCNQ3O43525 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC22.38■■□□□ 1.17
KCNQ3O43525 NME9-203ENST00000383180 2133 ntTSL 2 BASIC22.38■■□□□ 1.17
KCNQ3O43525 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC22.38■■□□□ 1.17
KCNQ3O43525 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC22.38■■□□□ 1.17
KCNQ3O43525 AL078644.1-201ENST00000609881 752 ntBASIC22.38■■□□□ 1.17
KCNQ3O43525 AQP6-205ENST00000618286 829 ntTSL 5 BASIC22.38■■□□□ 1.17
KCNQ3O43525 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC22.38■■□□□ 1.17
KCNQ3O43525 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
KCNQ3O43525 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms