Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MID1O15344 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MID1O15344 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
MID1O15344 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MID1O15344 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MID1O15344 AC097637.2-201ENST00000624096 1997 ntBASIC17.55■□□□□ 0.4
MID1O15344 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
MID1O15344 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MID1O15344 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.55■□□□□ 0.4
MID1O15344 ABALON-201ENST00000629058 1903 ntBASIC17.55■□□□□ 0.4
MID1O15344 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
MID1O15344 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MID1O15344 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.54■□□□□ 0.4
MID1O15344 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MID1O15344 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MID1O15344 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
MID1O15344 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
MID1O15344 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MID1O15344 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MID1O15344 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
MID1O15344 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MID1O15344 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.54■□□□□ 0.4
MID1O15344 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.54■□□□□ 0.4
MID1O15344 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.54■□□□□ 0.4
MID1O15344 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.54■□□□□ 0.4
MID1O15344 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
MID1O15344 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.54■□□□□ 0.4
MID1O15344 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.54■□□□□ 0.4
MID1O15344 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.54■□□□□ 0.4
MID1O15344 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.54■□□□□ 0.4
MID1O15344 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.54■□□□□ 0.4
MID1O15344 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.54■□□□□ 0.4
MID1O15344 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.54■□□□□ 0.4
MID1O15344 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.54■□□□□ 0.4
MID1O15344 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MID1O15344 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.54■□□□□ 0.4
MID1O15344 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.54■□□□□ 0.4
MID1O15344 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MID1O15344 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MID1O15344 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MID1O15344 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MID1O15344 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MID1O15344 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.54■□□□□ 0.4
MID1O15344 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MID1O15344 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MID1O15344 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MID1O15344 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MID1O15344 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MID1O15344 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MID1O15344 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.53■□□□□ 0.4
MID1O15344 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.53■□□□□ 0.4
MID1O15344 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MID1O15344 AC026471.1-201ENST00000564629 3026 ntBASIC17.53■□□□□ 0.4
MID1O15344 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
MID1O15344 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
MID1O15344 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MID1O15344 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.53■□□□□ 0.4
MID1O15344 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.53■□□□□ 0.4
MID1O15344 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.53■□□□□ 0.4
MID1O15344 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
MID1O15344 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MID1O15344 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.53■□□□□ 0.4
MID1O15344 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MID1O15344 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
MID1O15344 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
MID1O15344 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MID1O15344 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.53■□□□□ 0.4
MID1O15344 MYCLP1-201ENST00000372451 1075 ntBASIC17.53■□□□□ 0.4
MID1O15344 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MID1O15344 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MID1O15344 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
MID1O15344 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.53■□□□□ 0.4
MID1O15344 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
MID1O15344 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.53■□□□□ 0.4
MID1O15344 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.53■□□□□ 0.4
MID1O15344 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
MID1O15344 AC064836.3-201ENST00000607928 673 ntBASIC17.53■□□□□ 0.4
MID1O15344 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MID1O15344 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
MID1O15344 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
MID1O15344 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MID1O15344 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.53■□□□□ 0.4
MID1O15344 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MID1O15344 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.53■□□□□ 0.4
MID1O15344 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MID1O15344 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.53■□□□□ 0.4
MID1O15344 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MID1O15344 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MID1O15344 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MID1O15344 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MID1O15344 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.52■□□□□ 0.4
MID1O15344 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.52■□□□□ 0.4
MID1O15344 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MID1O15344 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.52■□□□□ 0.4
MID1O15344 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MID1O15344 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.52■□□□□ 0.4
MID1O15344 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
MID1O15344 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MID1O15344 BICD1-207ENST00000551848 1962 ntBASIC17.52■□□□□ 0.4
MID1O15344 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms