Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.71■□□□□ 0.27
CASQ2O14958 PNMA6B-201ENST00000538162 1200 ntBASIC16.71■□□□□ 0.27
CASQ2O14958 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.71■□□□□ 0.27
CASQ2O14958 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CASQ2O14958 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CASQ2O14958 NBPF21P-201ENST00000425093 1451 ntBASIC16.71■□□□□ 0.27
CASQ2O14958 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.71■□□□□ 0.27
CASQ2O14958 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CASQ2O14958 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.71■□□□□ 0.27
CASQ2O14958 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CASQ2O14958 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CASQ2O14958 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CASQ2O14958 AC132938.6-201ENST00000623828 1655 ntBASIC16.71■□□□□ 0.27
CASQ2O14958 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CASQ2O14958 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.71■□□□□ 0.27
CASQ2O14958 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.71■□□□□ 0.27
CASQ2O14958 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CASQ2O14958 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASQ2O14958 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASQ2O14958 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
CASQ2O14958 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
CASQ2O14958 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.7■□□□□ 0.26
CASQ2O14958 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASQ2O14958 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASQ2O14958 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASQ2O14958 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.7■□□□□ 0.26
CASQ2O14958 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CASQ2O14958 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CASQ2O14958 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.7■□□□□ 0.26
CASQ2O14958 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CASQ2O14958 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASQ2O14958 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
CASQ2O14958 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CASQ2O14958 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.7■□□□□ 0.26
CASQ2O14958 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CASQ2O14958 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CASQ2O14958 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
CASQ2O14958 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASQ2O14958 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.7■□□□□ 0.26
CASQ2O14958 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CASQ2O14958 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.7■□□□□ 0.26
CASQ2O14958 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.7■□□□□ 0.26
CASQ2O14958 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.7■□□□□ 0.26
CASQ2O14958 AC008622.2-201ENST00000617006 1229 ntBASIC16.7■□□□□ 0.26
CASQ2O14958 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASQ2O14958 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.7■□□□□ 0.26
CASQ2O14958 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASQ2O14958 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASQ2O14958 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASQ2O14958 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CASQ2O14958 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
CASQ2O14958 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.7■□□□□ 0.26
CASQ2O14958 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CASQ2O14958 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.7■□□□□ 0.26
CASQ2O14958 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.7■□□□□ 0.26
CASQ2O14958 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.7■□□□□ 0.26
CASQ2O14958 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CASQ2O14958 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASQ2O14958 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASQ2O14958 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASQ2O14958 AL024508.2-201ENST00000607749 1894 ntBASIC16.69■□□□□ 0.26
CASQ2O14958 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CASQ2O14958 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.69■□□□□ 0.26
CASQ2O14958 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CASQ2O14958 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CASQ2O14958 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CASQ2O14958 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CASQ2O14958 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
CASQ2O14958 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.69■□□□□ 0.26
CASQ2O14958 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.69■□□□□ 0.26
CASQ2O14958 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
CASQ2O14958 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.69■□□□□ 0.26
CASQ2O14958 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
CASQ2O14958 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.69■□□□□ 0.26
CASQ2O14958 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.69■□□□□ 0.26
CASQ2O14958 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.69■□□□□ 0.26
CASQ2O14958 AC091874.3-201ENST00000512672 1195 ntBASIC16.69■□□□□ 0.26
CASQ2O14958 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.69■□□□□ 0.26
CASQ2O14958 AC008687.6-201ENST00000596318 630 ntBASIC16.69■□□□□ 0.26
CASQ2O14958 AC004264.1-201ENST00000608354 794 ntBASIC16.69■□□□□ 0.26
CASQ2O14958 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
CASQ2O14958 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CASQ2O14958 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.69■□□□□ 0.26
CASQ2O14958 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.69■□□□□ 0.26
CASQ2O14958 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
CASQ2O14958 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CASQ2O14958 AC078925.2-201ENST00000624013 1973 ntBASIC16.69■□□□□ 0.26
CASQ2O14958 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.69■□□□□ 0.26
CASQ2O14958 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CASQ2O14958 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.69■□□□□ 0.26
CASQ2O14958 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CASQ2O14958 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASQ2O14958 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CASQ2O14958 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.68■□□□□ 0.26
CASQ2O14958 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASQ2O14958 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASQ2O14958 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASQ2O14958 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.68■□□□□ 0.26
CASQ2O14958 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASQ2O14958 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms