Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CDX4O14627 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDX4O14627 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDX4O14627 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDX4O14627 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.78■□□□□ 0.28
CDX4O14627 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDX4O14627 AKAP8P1-201ENST00000434743 1349 ntBASIC16.78■□□□□ 0.28
CDX4O14627 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDX4O14627 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.78■□□□□ 0.28
CDX4O14627 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDX4O14627 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDX4O14627 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDX4O14627 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
CDX4O14627 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.78■□□□□ 0.28
CDX4O14627 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.78■□□□□ 0.28
CDX4O14627 CR383656.12-201ENST00000549567 513 ntBASIC16.78■□□□□ 0.28
CDX4O14627 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.78■□□□□ 0.28
CDX4O14627 AL645728.2-201ENST00000641974 660 ntBASIC16.78■□□□□ 0.28
CDX4O14627 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.78■□□□□ 0.28
CDX4O14627 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.78■□□□□ 0.28
CDX4O14627 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDX4O14627 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDX4O14627 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDX4O14627 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.78■□□□□ 0.28
CDX4O14627 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
CDX4O14627 AL096828.2-201ENST00000567259 1965 ntBASIC16.78■□□□□ 0.28
CDX4O14627 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDX4O14627 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CDX4O14627 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDX4O14627 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.78■□□□□ 0.28
CDX4O14627 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDX4O14627 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDX4O14627 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.78■□□□□ 0.28
CDX4O14627 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDX4O14627 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDX4O14627 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.77■□□□□ 0.28
CDX4O14627 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.77■□□□□ 0.28
CDX4O14627 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.77■□□□□ 0.28
CDX4O14627 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDX4O14627 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDX4O14627 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CDX4O14627 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDX4O14627 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CDX4O14627 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDX4O14627 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.77■□□□□ 0.28
CDX4O14627 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDX4O14627 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDX4O14627 OR8S1-201ENST00000310194 1080 ntBASIC16.77■□□□□ 0.28
CDX4O14627 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDX4O14627 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.77■□□□□ 0.28
CDX4O14627 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.77■□□□□ 0.28
CDX4O14627 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.77■□□□□ 0.28
CDX4O14627 SPCS2P4-201ENST00000436160 681 ntBASIC16.77■□□□□ 0.28
CDX4O14627 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.77■□□□□ 0.28
CDX4O14627 CRB3P1-201ENST00000449338 276 ntBASIC16.77■□□□□ 0.28
CDX4O14627 AC087163.2-201ENST00000457299 853 ntBASIC16.77■□□□□ 0.28
CDX4O14627 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.77■□□□□ 0.28
CDX4O14627 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.77■□□□□ 0.28
CDX4O14627 IGHV3-42-201ENST00000520410 361 ntBASIC16.77■□□□□ 0.28
CDX4O14627 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.77■□□□□ 0.28
CDX4O14627 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDX4O14627 AC026150.2-201ENST00000564693 1156 ntBASIC16.77■□□□□ 0.28
CDX4O14627 RARRES2P8-201ENST00000566335 367 ntBASIC16.77■□□□□ 0.28
CDX4O14627 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.77■□□□□ 0.28
CDX4O14627 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.77■□□□□ 0.28
CDX4O14627 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDX4O14627 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.77■□□□□ 0.28
CDX4O14627 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDX4O14627 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDX4O14627 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CDX4O14627 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDX4O14627 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDX4O14627 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDX4O14627 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.76■□□□□ 0.27
CDX4O14627 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDX4O14627 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDX4O14627 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDX4O14627 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDX4O14627 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDX4O14627 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDX4O14627 HLA-V-201ENST00000429037 534 ntBASIC16.76■□□□□ 0.27
CDX4O14627 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
CDX4O14627 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.76■□□□□ 0.27
CDX4O14627 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.76■□□□□ 0.27
CDX4O14627 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.76■□□□□ 0.27
CDX4O14627 LINC01225-203ENST00000563550 1244 ntBASIC16.76■□□□□ 0.27
CDX4O14627 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.76■□□□□ 0.27
CDX4O14627 AL158211.3-201ENST00000607385 239 ntBASIC16.76■□□□□ 0.27
CDX4O14627 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.76■□□□□ 0.27
CDX4O14627 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.76■□□□□ 0.27
CDX4O14627 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDX4O14627 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDX4O14627 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDX4O14627 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDX4O14627 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDX4O14627 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
CDX4O14627 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.76■□□□□ 0.27
CDX4O14627 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.76■□□□□ 0.27
CDX4O14627 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDX4O14627 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms