Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBFD1O14562 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBFD1O14562 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.04■□□□□ 0.32
UBFD1O14562 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBFD1O14562 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBFD1O14562 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBFD1O14562 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.04■□□□□ 0.32
UBFD1O14562 HOMER2P1-201ENST00000455653 964 ntBASIC17.04■□□□□ 0.32
UBFD1O14562 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.04■□□□□ 0.32
UBFD1O14562 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBFD1O14562 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.04■□□□□ 0.32
UBFD1O14562 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
UBFD1O14562 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBFD1O14562 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.04■□□□□ 0.32
UBFD1O14562 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBFD1O14562 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBFD1O14562 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBFD1O14562 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.04■□□□□ 0.32
UBFD1O14562 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
UBFD1O14562 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBFD1O14562 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBFD1O14562 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
UBFD1O14562 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.04■□□□□ 0.32
UBFD1O14562 AC105020.1-201ENST00000435356 2205 ntBASIC17.04■□□□□ 0.32
UBFD1O14562 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBFD1O14562 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBFD1O14562 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBFD1O14562 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
UBFD1O14562 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.04■□□□□ 0.32
UBFD1O14562 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.04■□□□□ 0.32
UBFD1O14562 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBFD1O14562 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBFD1O14562 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBFD1O14562 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBFD1O14562 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.03■□□□□ 0.32
UBFD1O14562 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBFD1O14562 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBFD1O14562 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBFD1O14562 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBFD1O14562 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
UBFD1O14562 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.03■□□□□ 0.32
UBFD1O14562 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBFD1O14562 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBFD1O14562 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBFD1O14562 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.03■□□□□ 0.32
UBFD1O14562 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.03■□□□□ 0.32
UBFD1O14562 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBFD1O14562 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.03■□□□□ 0.32
UBFD1O14562 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
UBFD1O14562 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.03■□□□□ 0.32
UBFD1O14562 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
UBFD1O14562 AC019129.2-201ENST00000609837 1235 ntBASIC17.03■□□□□ 0.32
UBFD1O14562 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.03■□□□□ 0.32
UBFD1O14562 LINC02012-201ENST00000608206 1725 ntBASIC17.03■□□□□ 0.32
UBFD1O14562 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
UBFD1O14562 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBFD1O14562 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
UBFD1O14562 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBFD1O14562 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBFD1O14562 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBFD1O14562 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBFD1O14562 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBFD1O14562 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBFD1O14562 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBFD1O14562 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBFD1O14562 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBFD1O14562 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.03■□□□□ 0.32
UBFD1O14562 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
UBFD1O14562 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
UBFD1O14562 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.02■□□□□ 0.32
UBFD1O14562 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
UBFD1O14562 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBFD1O14562 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBFD1O14562 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBFD1O14562 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBFD1O14562 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBFD1O14562 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBFD1O14562 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.02■□□□□ 0.32
UBFD1O14562 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.02■□□□□ 0.32
UBFD1O14562 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
UBFD1O14562 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBFD1O14562 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBFD1O14562 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBFD1O14562 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
UBFD1O14562 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.02■□□□□ 0.32
UBFD1O14562 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBFD1O14562 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBFD1O14562 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBFD1O14562 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBFD1O14562 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBFD1O14562 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBFD1O14562 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBFD1O14562 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
UBFD1O14562 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
UBFD1O14562 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.02■□□□□ 0.32
UBFD1O14562 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBFD1O14562 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.02■□□□□ 0.32
UBFD1O14562 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBFD1O14562 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBFD1O14562 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms