Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.24■□□□□ 0.35
CDC7O00311 AC019129.2-201ENST00000609837 1235 ntBASIC17.24■□□□□ 0.35
CDC7O00311 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CDC7O00311 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.24■□□□□ 0.35
CDC7O00311 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDC7O00311 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDC7O00311 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
CDC7O00311 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDC7O00311 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.24■□□□□ 0.35
CDC7O00311 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDC7O00311 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDC7O00311 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDC7O00311 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.24■□□□□ 0.35
CDC7O00311 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.24■□□□□ 0.35
CDC7O00311 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.24■□□□□ 0.35
CDC7O00311 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDC7O00311 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CDC7O00311 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.23■□□□□ 0.35
CDC7O00311 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC7O00311 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDC7O00311 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.23■□□□□ 0.35
CDC7O00311 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CDC7O00311 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC7O00311 AC009053.2-201ENST00000563701 2365 ntBASIC17.23■□□□□ 0.35
CDC7O00311 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC7O00311 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDC7O00311 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.23■□□□□ 0.35
CDC7O00311 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CDC7O00311 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC7O00311 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CDC7O00311 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDC7O00311 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDC7O00311 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.23■□□□□ 0.35
CDC7O00311 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC7O00311 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.23■□□□□ 0.35
CDC7O00311 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC7O00311 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.23■□□□□ 0.35
CDC7O00311 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC7O00311 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CDC7O00311 AL121672.3-201ENST00000608644 468 ntBASIC17.23■□□□□ 0.35
CDC7O00311 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.23■□□□□ 0.35
CDC7O00311 AC116407.4-201ENST00000623319 1061 ntBASIC17.23■□□□□ 0.35
CDC7O00311 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDC7O00311 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDC7O00311 PRORSD1P-202ENST00000563365 2154 ntBASIC17.23■□□□□ 0.35
CDC7O00311 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC7O00311 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC7O00311 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC7O00311 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC7O00311 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC7O00311 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC7O00311 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDC7O00311 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDC7O00311 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDC7O00311 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDC7O00311 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDC7O00311 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC7O00311 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDC7O00311 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC7O00311 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC7O00311 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.22■□□□□ 0.35
CDC7O00311 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC7O00311 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC7O00311 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CDC7O00311 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC7O00311 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CDC7O00311 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDC7O00311 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CDC7O00311 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC7O00311 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDC7O00311 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC7O00311 CHCHD2P8-201ENST00000429873 447 ntBASIC17.22■□□□□ 0.35
CDC7O00311 AC087388.1-201ENST00000571370 1112 ntBASIC17.22■□□□□ 0.35
CDC7O00311 AC109462.3-201ENST00000573934 613 ntBASIC17.22■□□□□ 0.35
CDC7O00311 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDC7O00311 AP005901.3-202ENST00000581653 237 ntBASIC17.22■□□□□ 0.35
CDC7O00311 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.22■□□□□ 0.35
CDC7O00311 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDC7O00311 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDC7O00311 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC7O00311 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC7O00311 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC7O00311 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDC7O00311 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC7O00311 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.21■□□□□ 0.35
CDC7O00311 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.21■□□□□ 0.35
CDC7O00311 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDC7O00311 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC7O00311 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC7O00311 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CDC7O00311 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC7O00311 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CDC7O00311 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.21■□□□□ 0.35
CDC7O00311 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC7O00311 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC7O00311 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC7O00311 PCED1CP-201ENST00000419887 785 ntBASIC17.21■□□□□ 0.35
CDC7O00311 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.21■□□□□ 0.35
CDC7O00311 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.21■□□□□ 0.35
CDC7O00311 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms