Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDLIM1O00151 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDLIM1O00151 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.77■□□□□ 0.28
PDLIM1O00151 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDLIM1O00151 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDLIM1O00151 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PDLIM1O00151 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDLIM1O00151 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.77■□□□□ 0.28
PDLIM1O00151 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDLIM1O00151 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.77■□□□□ 0.28
PDLIM1O00151 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.77■□□□□ 0.28
PDLIM1O00151 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.77■□□□□ 0.28
PDLIM1O00151 CA15P1-201ENST00000481698 905 ntBASIC16.77■□□□□ 0.28
PDLIM1O00151 C2orf69P3-201ENST00000565542 1120 ntBASIC16.77■□□□□ 0.28
PDLIM1O00151 AC133561.5-201ENST00000635547 218 ntBASIC16.77■□□□□ 0.28
PDLIM1O00151 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDLIM1O00151 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDLIM1O00151 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDLIM1O00151 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDLIM1O00151 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDLIM1O00151 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.77■□□□□ 0.27
PDLIM1O00151 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
PDLIM1O00151 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
PDLIM1O00151 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PDLIM1O00151 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDLIM1O00151 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDLIM1O00151 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
PDLIM1O00151 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDLIM1O00151 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PDLIM1O00151 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PDLIM1O00151 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
PDLIM1O00151 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.76■□□□□ 0.27
PDLIM1O00151 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.76■□□□□ 0.27
PDLIM1O00151 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM1O00151 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM1O00151 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM1O00151 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM1O00151 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.76■□□□□ 0.27
PDLIM1O00151 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.76■□□□□ 0.27
PDLIM1O00151 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM1O00151 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.76■□□□□ 0.27
PDLIM1O00151 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM1O00151 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PDLIM1O00151 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.76■□□□□ 0.27
PDLIM1O00151 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.76■□□□□ 0.27
PDLIM1O00151 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM1O00151 SLC25A1P2-201ENST00000430693 912 ntBASIC16.76■□□□□ 0.27
PDLIM1O00151 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.76■□□□□ 0.27
PDLIM1O00151 EGLN1P1-201ENST00000531623 762 ntBASIC16.76■□□□□ 0.27
PDLIM1O00151 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PDLIM1O00151 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.76■□□□□ 0.27
PDLIM1O00151 LINC01023-201ENST00000606054 436 ntBASIC16.76■□□□□ 0.27
PDLIM1O00151 AL023803.3-201ENST00000615559 522 ntBASIC16.76■□□□□ 0.27
PDLIM1O00151 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM1O00151 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM1O00151 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.76■□□□□ 0.27
PDLIM1O00151 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.76■□□□□ 0.27
PDLIM1O00151 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.76■□□□□ 0.27
PDLIM1O00151 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM1O00151 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
PDLIM1O00151 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PDLIM1O00151 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM1O00151 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM1O00151 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM1O00151 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM1O00151 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PDLIM1O00151 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM1O00151 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.76■□□□□ 0.27
PDLIM1O00151 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM1O00151 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM1O00151 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.75■□□□□ 0.27
PDLIM1O00151 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
PDLIM1O00151 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM1O00151 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM1O00151 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM1O00151 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM1O00151 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM1O00151 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.75■□□□□ 0.27
PDLIM1O00151 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM1O00151 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.75■□□□□ 0.27
PDLIM1O00151 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.75■□□□□ 0.27
PDLIM1O00151 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
PDLIM1O00151 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM1O00151 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM1O00151 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
PDLIM1O00151 AL023284.2-201ENST00000405850 579 ntBASIC16.75■□□□□ 0.27
PDLIM1O00151 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM1O00151 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PDLIM1O00151 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM1O00151 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM1O00151 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.75■□□□□ 0.27
PDLIM1O00151 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.75■□□□□ 0.27
PDLIM1O00151 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.75■□□□□ 0.27
PDLIM1O00151 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.75■□□□□ 0.27
PDLIM1O00151 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM1O00151 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM1O00151 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM1O00151 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM1O00151 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM1O00151 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms