Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 ELK2BP-201ENST00000415014 1224 ntBASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AC034105.1-201ENST00000563488 319 ntBASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AL139424.1-201ENST00000607572 797 ntBASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 FAM197Y3-203ENST00000618346 717 ntBASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AC097637.2-201ENST00000624096 1997 ntBASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AL354751.1-201ENST00000412768 1863 ntBASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AC140113.2-201ENST00000604370 208 ntBASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 LINC01451-201ENST00000623792 534 ntBASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms