Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 AC093010.1-201ENST00000473625 1624 ntBASIC16.45■□□□□ 0.22
CLCA1A8K7I4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.45■□□□□ 0.22
CLCA1A8K7I4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 TSPY22P-201ENST00000427496 604 ntBASIC16.44■□□□□ 0.22
CLCA1A8K7I4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 ATP5G2P1-201ENST00000433580 426 ntBASIC16.44■□□□□ 0.22
CLCA1A8K7I4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 TSSC2-201ENST00000450217 709 ntBASIC16.44■□□□□ 0.22
CLCA1A8K7I4 AP003733.1-201ENST00000491725 852 ntBASIC16.44■□□□□ 0.22
CLCA1A8K7I4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 RNF126P1-202ENST00000569893 925 ntBASIC16.44■□□□□ 0.22
CLCA1A8K7I4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 AC018695.7-201ENST00000624587 2492 ntBASIC16.44■□□□□ 0.22
CLCA1A8K7I4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.44■□□□□ 0.22
CLCA1A8K7I4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCA1A8K7I4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 AC016734.2-201ENST00000624325 1377 ntBASIC16.43■□□□□ 0.22
CLCA1A8K7I4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 KRT8P26-201ENST00000534154 1276 ntBASIC16.43■□□□□ 0.22
CLCA1A8K7I4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 AL691432.3-201ENST00000621860 400 ntBASIC16.43■□□□□ 0.22
CLCA1A8K7I4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 CROCCP2-202ENST00000412962 2773 ntBASIC16.43■□□□□ 0.22
CLCA1A8K7I4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
CLCA1A8K7I4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms