Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.03■□□□□ -0
TMEM235A6NFC5 AC024243.1-201ENST00000609234 778 ntBASIC15.03■□□□□ -0
TMEM235A6NFC5 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM235A6NFC5 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM235A6NFC5 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM235A6NFC5 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM235A6NFC5 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TMEM235A6NFC5 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TMEM235A6NFC5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM235A6NFC5 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM235A6NFC5 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TMEM235A6NFC5 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM235A6NFC5 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM235A6NFC5 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM235A6NFC5 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM235A6NFC5 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
TMEM235A6NFC5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TMEM235A6NFC5 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.03■□□□□ -0
TMEM235A6NFC5 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.02■□□□□ -0
TMEM235A6NFC5 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM235A6NFC5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.02■□□□□ -0
TMEM235A6NFC5 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.02■□□□□ -0
TMEM235A6NFC5 CICP6-201ENST00000457191 2729 ntBASIC15.02■□□□□ -0
TMEM235A6NFC5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM235A6NFC5 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.02■□□□□ -0
TMEM235A6NFC5 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM235A6NFC5 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.02■□□□□ -0
TMEM235A6NFC5 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM235A6NFC5 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.02■□□□□ -0
TMEM235A6NFC5 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM235A6NFC5 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TMEM235A6NFC5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.02■□□□□ -0
TMEM235A6NFC5 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM235A6NFC5 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
TMEM235A6NFC5 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.02■□□□□ -0
TMEM235A6NFC5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM235A6NFC5 RPS2P55-201ENST00000397318 883 ntBASIC15.02■□□□□ -0
TMEM235A6NFC5 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.02■□□□□ -0
TMEM235A6NFC5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.02■□□□□ -0
TMEM235A6NFC5 AC107956.1-201ENST00000494359 873 ntBASIC15.02■□□□□ -0
TMEM235A6NFC5 CD99P1-205ENST00000527459 561 ntBASIC15.02■□□□□ -0
TMEM235A6NFC5 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.02■□□□□ -0
TMEM235A6NFC5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.02■□□□□ -0
TMEM235A6NFC5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
TMEM235A6NFC5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.02■□□□□ -0
TMEM235A6NFC5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.02■□□□□ -0
TMEM235A6NFC5 AC026471.5-201ENST00000615068 467 ntBASIC15.02■□□□□ -0
TMEM235A6NFC5 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM235A6NFC5 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM235A6NFC5 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM235A6NFC5 AC008741.2-201ENST00000612792 3115 ntBASIC15.02□□□□□ -0.01
TMEM235A6NFC5 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TMEM235A6NFC5 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM235A6NFC5 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM235A6NFC5 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
TMEM235A6NFC5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM235A6NFC5 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM235A6NFC5 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM235A6NFC5 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
TMEM235A6NFC5 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM235A6NFC5 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM235A6NFC5 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM235A6NFC5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM235A6NFC5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM235A6NFC5 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.02□□□□□ -0.01
TMEM235A6NFC5 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM235A6NFC5 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM235A6NFC5 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM235A6NFC5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 AC007663.1-201ENST00000438948 1240 ntBASIC15.01□□□□□ -0.01
TMEM235A6NFC5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 AP001412.1-201ENST00000608405 714 ntBASIC15.01□□□□□ -0.01
TMEM235A6NFC5 AC116562.4-202ENST00000641738 218 ntBASIC15.01□□□□□ -0.01
TMEM235A6NFC5 AL049637.2-201ENST00000641778 930 ntBASIC15.01□□□□□ -0.01
TMEM235A6NFC5 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.01□□□□□ -0.01
TMEM235A6NFC5 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms