Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3BA6NDS4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3BA6NDS4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3BA6NDS4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.8■□□□□ 0.44
TBC1D3BA6NDS4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 VN2R19P-201ENST00000442399 1052 ntBASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 AC002558.1-201ENST00000488906 803 ntBASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 AC004790.2-201ENST00000623588 572 ntBASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.79■□□□□ 0.44
TBC1D3BA6NDS4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 AC104581.1-202ENST00000635932 2618 ntBASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3BA6NDS4 FLJ13224-201ENST00000313737 1514 ntBASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 KRT18P55-202ENST00000578578 1546 ntBASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 PRSS29P-201ENST00000440800 595 ntBASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3BA6NDS4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
TBC1D3BA6NDS4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.77■□□□□ 0.43
TBC1D3BA6NDS4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.77■□□□□ 0.43
TBC1D3BA6NDS4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TBC1D3BA6NDS4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.77■□□□□ 0.43
TBC1D3BA6NDS4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms