Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SBNO1A3KN83 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SBNO1A3KN83 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SBNO1A3KN83 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SBNO1A3KN83 GPS2P2-201ENST00000430745 888 ntBASIC23.59■■□□□ 1.37
SBNO1A3KN83 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC23.59■■□□□ 1.37
SBNO1A3KN83 AC069335.1-201ENST00000489972 472 ntBASIC23.59■■□□□ 1.37
SBNO1A3KN83 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC23.59■■□□□ 1.37
SBNO1A3KN83 POLD4-211ENST00000539074 714 ntTSL 3 BASIC23.59■■□□□ 1.37
SBNO1A3KN83 NAA60-208ENST00000570819 833 ntTSL 2 BASIC23.59■■□□□ 1.37
SBNO1A3KN83 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC23.59■■□□□ 1.37
SBNO1A3KN83 BSG-214ENST00000614867 960 ntTSL 3 BASIC23.59■■□□□ 1.37
SBNO1A3KN83 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SBNO1A3KN83 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SBNO1A3KN83 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SBNO1A3KN83 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SBNO1A3KN83 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
SBNO1A3KN83 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
SBNO1A3KN83 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC23.59■■□□□ 1.37
SBNO1A3KN83 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
SBNO1A3KN83 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SBNO1A3KN83 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC23.58■■□□□ 1.37
SBNO1A3KN83 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SBNO1A3KN83 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
SBNO1A3KN83 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SBNO1A3KN83 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SBNO1A3KN83 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
SBNO1A3KN83 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
SBNO1A3KN83 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SBNO1A3KN83 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SBNO1A3KN83 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC23.58■■□□□ 1.37
SBNO1A3KN83 AC002472.2-201ENST00000442739 958 ntBASIC23.58■■□□□ 1.37
SBNO1A3KN83 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC23.58■■□□□ 1.37
SBNO1A3KN83 HLA-J-202ENST00000469281 1241 ntBASIC23.58■■□□□ 1.37
SBNO1A3KN83 RN7SL589P-201ENST00000481268 310 ntBASIC23.58■■□□□ 1.37
SBNO1A3KN83 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC23.58■■□□□ 1.37
SBNO1A3KN83 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SBNO1A3KN83 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
SBNO1A3KN83 AC098818.2-201ENST00000564925 2320 ntBASIC23.58■■□□□ 1.37
SBNO1A3KN83 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SBNO1A3KN83 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SBNO1A3KN83 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
SBNO1A3KN83 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SBNO1A3KN83 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
SBNO1A3KN83 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC23.58■■□□□ 1.36
SBNO1A3KN83 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
SBNO1A3KN83 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
SBNO1A3KN83 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SBNO1A3KN83 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SBNO1A3KN83 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SBNO1A3KN83 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SBNO1A3KN83 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC23.57■■□□□ 1.36
SBNO1A3KN83 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
SBNO1A3KN83 AC236430.1-201ENST00000402231 743 ntBASIC23.57■■□□□ 1.36
SBNO1A3KN83 SPDYE11-202ENST00000450699 704 ntBASIC23.57■■□□□ 1.36
SBNO1A3KN83 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
SBNO1A3KN83 INGX-202ENST00000489074 768 ntBASIC23.57■■□□□ 1.36
SBNO1A3KN83 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC23.57■■□□□ 1.36
SBNO1A3KN83 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC23.57■■□□□ 1.36
SBNO1A3KN83 AC005225.4-201ENST00000557330 545 ntBASIC23.57■■□□□ 1.36
SBNO1A3KN83 SPDYE9P-201ENST00000570642 692 ntBASIC23.57■■□□□ 1.36
SBNO1A3KN83 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC23.57■■□□□ 1.36
SBNO1A3KN83 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC23.57■■□□□ 1.36
SBNO1A3KN83 SPDYE10P-202ENST00000612005 668 ntBASIC23.57■■□□□ 1.36
SBNO1A3KN83 SPDYE8P-202ENST00000612377 668 ntBASIC23.57■■□□□ 1.36
SBNO1A3KN83 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC23.57■■□□□ 1.36
SBNO1A3KN83 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SBNO1A3KN83 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SBNO1A3KN83 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SBNO1A3KN83 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SBNO1A3KN83 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SBNO1A3KN83 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SBNO1A3KN83 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
SBNO1A3KN83 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC23.57■■□□□ 1.36
SBNO1A3KN83 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC23.57■■□□□ 1.36
SBNO1A3KN83 AC063926.2-201ENST00000623766 1308 ntBASIC23.57■■□□□ 1.36
SBNO1A3KN83 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SBNO1A3KN83 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SBNO1A3KN83 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC23.56■■□□□ 1.36
SBNO1A3KN83 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SBNO1A3KN83 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SBNO1A3KN83 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC23.56■■□□□ 1.36
SBNO1A3KN83 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC23.56■■□□□ 1.36
SBNO1A3KN83 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SBNO1A3KN83 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SBNO1A3KN83 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SBNO1A3KN83 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SBNO1A3KN83 AL671277.1-201ENST00000429656 993 ntBASIC23.56■■□□□ 1.36
SBNO1A3KN83 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
SBNO1A3KN83 AC087163.2-201ENST00000457299 853 ntBASIC23.56■■□□□ 1.36
SBNO1A3KN83 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC23.56■■□□□ 1.36
SBNO1A3KN83 TSFM-210ENST00000550559 897 ntTSL 5 BASIC23.56■■□□□ 1.36
SBNO1A3KN83 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SBNO1A3KN83 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SBNO1A3KN83 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SBNO1A3KN83 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SBNO1A3KN83 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC23.56■■□□□ 1.36
SBNO1A3KN83 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
SBNO1A3KN83 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SBNO1A3KN83 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms