Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 AC103564.2-201ENST00000432853 1299 ntBASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 AC096582.2-201ENST00000510860 516 ntBASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 LINC00896-202ENST00000609602 2128 ntBASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 KRT16P4-201ENST00000453883 522 ntBASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 AC002558.1-201ENST00000488906 803 ntBASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 RCN1P2-201ENST00000398357 915 ntBASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 NUS1P2-201ENST00000417358 873 ntBASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 FDX1P1-201ENST00000449115 551 ntBASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 AC114341.1-201ENST00000618070 349 ntBASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 INTS4P1-201ENST00000438455 1935 ntBASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.98■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.98■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms