Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 BCRP1-201ENST00000444246 691 ntBASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 SPDYE11-202ENST00000450699 704 ntBASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 SPDYE9P-201ENST00000570642 692 ntBASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 SPDYE10P-202ENST00000612005 668 ntBASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 SPDYE8P-202ENST00000612377 668 ntBASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 AJ011932.1-201ENST00000621707 465 ntBASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN10AQ9Y5Y9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 AC090164.3-201ENST00000610780 2143 ntBASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 KRT8P48-201ENST00000515599 1220 ntBASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 AL135744.1-201ENST00000565098 629 ntBASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 AC015911.4-201ENST00000588022 1070 ntBASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 Z92544.3-201ENST00000624747 417 ntBASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN10AQ9Y5Y9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 AC004449.1-201ENST00000564240 433 ntBASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 TIMM8BP1-201ENST00000452384 211 ntBASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 REXO1L3P-201ENST00000622202 1288 ntBASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 LINC00628-201ENST00000628516 1289 ntBASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms