Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.67■□□□□ 0.74
COL4A3BPQ9Y5P4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL4A3BPQ9Y5P4 AC007967.3-201ENST00000434308 558 ntBASIC19.67■□□□□ 0.74
COL4A3BPQ9Y5P4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.67■□□□□ 0.74
COL4A3BPQ9Y5P4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.67■□□□□ 0.74
COL4A3BPQ9Y5P4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.67■□□□□ 0.74
COL4A3BPQ9Y5P4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL4A3BPQ9Y5P4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL4A3BPQ9Y5P4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL4A3BPQ9Y5P4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.67■□□□□ 0.74
COL4A3BPQ9Y5P4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL4A3BPQ9Y5P4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.67■□□□□ 0.74
COL4A3BPQ9Y5P4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL4A3BPQ9Y5P4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COL4A3BPQ9Y5P4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL4A3BPQ9Y5P4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COL4A3BPQ9Y5P4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL4A3BPQ9Y5P4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL4A3BPQ9Y5P4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
COL4A3BPQ9Y5P4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 FAM220CP-201ENST00000395253 831 ntBASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 AC008608.2-201ENST00000606089 416 ntBASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 AP001269.4-201ENST00000609611 512 ntBASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 AC010460.3-201ENST00000511359 1579 ntBASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
COL4A3BPQ9Y5P4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
COL4A3BPQ9Y5P4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.64■□□□□ 0.74
COL4A3BPQ9Y5P4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
COL4A3BPQ9Y5P4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
COL4A3BPQ9Y5P4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL4A3BPQ9Y5P4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL4A3BPQ9Y5P4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 COX5BP2-201ENST00000392354 334 ntBASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 AC106795.1-205ENST00000512851 1056 ntBASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 LINC01451-201ENST00000623792 534 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms