Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 AC006449.5-201ENST00000610658 2098 ntBASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 NFIC-211ENST00000641145 8399 ntBASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 RCN1P1-201ENST00000400413 996 ntBASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 MESTP1-201ENST00000404287 994 ntBASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 SLC25A1P4-201ENST00000567977 778 ntBASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 AC022898.2-201ENST00000616822 1312 ntBASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGB1Q9Y5G3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 AL445228.2-201ENST00000605589 952 ntBASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 AC116353.5-201ENST00000638148 1699 ntBASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 AC099343.3-201ENST00000605834 2503 ntBASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 CYP2T1P-202ENST00000641596 2535 ntBASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGB1Q9Y5G3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 AL135905.2-201ENST00000584934 1404 ntBASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 REXO1L11P-201ENST00000620964 1927 ntBASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PCDHGB1Q9Y5G3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms