Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB3Q9Y5E6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 AC079776.4-201ENST00000511039 504 ntBASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 AC104692.2-201ENST00000603054 253 ntBASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 AL121912.1-201ENST00000603683 238 ntBASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 NSUN5P1-202ENST00000421140 1535 ntBASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 NSUN5P2-203ENST00000457352 1529 ntBASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDHB3Q9Y5E6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 AL022342.1-201ENST00000400363 863 ntBASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 TSPY12P-201ENST00000421279 868 ntBASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 AC079781.3-201ENST00000449110 356 ntBASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 KRT16P4-201ENST00000453883 522 ntBASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 AP005901.3-202ENST00000581653 237 ntBASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB3Q9Y5E6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms