Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.42□□□□□ -0.1
RCL1Q9Y2P8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RCL1Q9Y2P8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RCL1Q9Y2P8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.42□□□□□ -0.1
RCL1Q9Y2P8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.42□□□□□ -0.1
RCL1Q9Y2P8 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RCL1Q9Y2P8 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
RCL1Q9Y2P8 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.42□□□□□ -0.1
RCL1Q9Y2P8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RCL1Q9Y2P8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RCL1Q9Y2P8 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RCL1Q9Y2P8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RCL1Q9Y2P8 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RCL1Q9Y2P8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.42□□□□□ -0.1
RCL1Q9Y2P8 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RCL1Q9Y2P8 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 AC016396.2-201ENST00000562575 1417 ntBASIC14.41□□□□□ -0.1
RCL1Q9Y2P8 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 AC132872.4-202ENST00000622924 2756 ntBASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 AL109923.1-201ENST00000618799 583 ntBASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RCL1Q9Y2P8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms