Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 OR6D1P-203ENST00000641209 4860 ntBASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 AC046158.3-201ENST00000624947 2558 ntBASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 HLA-F-220ENST00000434407 884 ntBASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
CHMP2BQ9UQN3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 LIN28AP1-201ENST00000429574 405 ntBASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 ATP5G1P1-201ENST00000448724 379 ntBASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 COX11P1-201ENST00000489116 835 ntBASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 AC093827.2-201ENST00000512654 315 ntBASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2BQ9UQN3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHMP2BQ9UQN3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms