Protein–RNA interactions for Protein: Q9UJ68

MSRA, Mitochondrial peptide methionine sulfoxide reductase, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSRAQ9UJ68 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
MSRAQ9UJ68 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
MSRAQ9UJ68 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MSRAQ9UJ68 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
MSRAQ9UJ68 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
MSRAQ9UJ68 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
MSRAQ9UJ68 ACTG1P4-201ENST00000425123 1122 ntBASIC18.58■□□□□ 0.56
MSRAQ9UJ68 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.58■□□□□ 0.56
MSRAQ9UJ68 AC243562.1-201ENST00000560672 389 ntBASIC18.58■□□□□ 0.56
MSRAQ9UJ68 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.58■□□□□ 0.56
MSRAQ9UJ68 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MSRAQ9UJ68 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
MSRAQ9UJ68 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MSRAQ9UJ68 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MSRAQ9UJ68 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 AKAP8P1-201ENST00000434743 1349 ntBASIC18.57■□□□□ 0.56
MSRAQ9UJ68 AC129492.6-201ENST00000611383 1305 ntBASIC18.57■□□□□ 0.56
MSRAQ9UJ68 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 IGHV3-62-201ENST00000520057 340 ntBASIC18.57■□□□□ 0.56
MSRAQ9UJ68 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 AL135744.1-201ENST00000565098 629 ntBASIC18.57■□□□□ 0.56
MSRAQ9UJ68 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 AL158211.3-201ENST00000607385 239 ntBASIC18.57■□□□□ 0.56
MSRAQ9UJ68 AL645728.2-201ENST00000641974 660 ntBASIC18.57■□□□□ 0.56
MSRAQ9UJ68 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSRAQ9UJ68 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 AC073130.3-201ENST00000624389 2278 ntBASIC18.56■□□□□ 0.56
MSRAQ9UJ68 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 MYCLP1-201ENST00000372451 1075 ntBASIC18.56■□□□□ 0.56
MSRAQ9UJ68 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 GPS2P2-201ENST00000430745 888 ntBASIC18.56■□□□□ 0.56
MSRAQ9UJ68 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 RARRES2P8-201ENST00000566335 367 ntBASIC18.56■□□□□ 0.56
MSRAQ9UJ68 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.56■□□□□ 0.56
MSRAQ9UJ68 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MSRAQ9UJ68 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
MSRAQ9UJ68 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MSRAQ9UJ68 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
MSRAQ9UJ68 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MSRAQ9UJ68 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MSRAQ9UJ68 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MSRAQ9UJ68 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MSRAQ9UJ68 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.55■□□□□ 0.56
MSRAQ9UJ68 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms