Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.23■□□□□ 0.03
TREM2Q9NZC2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TREM2Q9NZC2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.23■□□□□ 0.03
TREM2Q9NZC2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TREM2Q9NZC2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TREM2Q9NZC2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TREM2Q9NZC2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TREM2Q9NZC2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TREM2Q9NZC2 AL732292.2-201ENST00000609649 430 ntBASIC15.23■□□□□ 0.03
TREM2Q9NZC2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.23■□□□□ 0.03
TREM2Q9NZC2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.23■□□□□ 0.03
TREM2Q9NZC2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TREM2Q9NZC2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TREM2Q9NZC2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TREM2Q9NZC2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.23■□□□□ 0.03
TREM2Q9NZC2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TREM2Q9NZC2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TREM2Q9NZC2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TREM2Q9NZC2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
TREM2Q9NZC2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 AC004870.1-201ENST00000315132 882 ntBASIC15.22■□□□□ 0.03
TREM2Q9NZC2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 AC068472.1-201ENST00000474589 881 ntBASIC15.22■□□□□ 0.03
TREM2Q9NZC2 DUTP2-201ENST00000519164 463 ntBASIC15.22■□□□□ 0.03
TREM2Q9NZC2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 AC091304.2-201ENST00000564639 760 ntBASIC15.22■□□□□ 0.03
TREM2Q9NZC2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 AP005901.3-202ENST00000581653 237 ntBASIC15.22■□□□□ 0.03
TREM2Q9NZC2 LINC01711-201ENST00000598340 967 ntBASIC15.22■□□□□ 0.03
TREM2Q9NZC2 AC099336.1-202ENST00000602961 463 ntBASIC15.22■□□□□ 0.03
TREM2Q9NZC2 IFNL4P1-201ENST00000607083 540 ntBASIC15.22■□□□□ 0.03
TREM2Q9NZC2 AL121772.3-201ENST00000610840 674 ntBASIC15.22■□□□□ 0.03
TREM2Q9NZC2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TREM2Q9NZC2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 MINOS1P3-201ENST00000457048 203 ntBASIC15.21■□□□□ 0.03
TREM2Q9NZC2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 Z69720.1-201ENST00000601483 472 ntBASIC15.21■□□□□ 0.03
TREM2Q9NZC2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms