Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 MIR662-201ENST00000384847 95 ntBASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
THUMPD1Q9NXG2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 YBX1P2-201ENST00000489612 999 ntBASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 GPR32P1-201ENST00000601788 811 ntBASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 AC011558.1-201ENST00000623459 338 ntBASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 AC097493.4-201ENST00000641197 219 ntBASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
THUMPD1Q9NXG2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 AL353692.3-201ENST00000407031 1396 ntBASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 SPDYE15P-201ENST00000424157 909 ntBASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THUMPD1Q9NXG2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.53■□□□□ 0.24
THUMPD1Q9NXG2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.53■□□□□ 0.24
THUMPD1Q9NXG2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
THUMPD1Q9NXG2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
THUMPD1Q9NXG2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
THUMPD1Q9NXG2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
THUMPD1Q9NXG2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
THUMPD1Q9NXG2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
THUMPD1Q9NXG2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
THUMPD1Q9NXG2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms