Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 FDX1P1-201ENST00000449115 551 ntBASIC16.59■□□□□ 0.25
KLHL1Q9NR64 AC009078.2-202ENST00000463353 338 ntBASIC16.59■□□□□ 0.25
KLHL1Q9NR64 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL1Q9NR64 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.58■□□□□ 0.25
KLHL1Q9NR64 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
KLHL1Q9NR64 LINC00602-201ENST00000629776 2065 ntBASIC16.58■□□□□ 0.25
KLHL1Q9NR64 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
KLHL1Q9NR64 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
KLHL1Q9NR64 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
KLHL1Q9NR64 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
KLHL1Q9NR64 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
KLHL1Q9NR64 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
KLHL1Q9NR64 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
KLHL1Q9NR64 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 AC113404.2-201ENST00000507884 177 ntBASIC16.58■□□□□ 0.24
KLHL1Q9NR64 AC096582.2-201ENST00000510860 516 ntBASIC16.58■□□□□ 0.24
KLHL1Q9NR64 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KLHL1Q9NR64 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 PKD1P5-201ENST00000532415 10291 ntBASIC16.57■□□□□ 0.24
KLHL1Q9NR64 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 KRT16P4-201ENST00000453883 522 ntBASIC16.57■□□□□ 0.24
KLHL1Q9NR64 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms